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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04734 ATGGACGCTTCTGCTGTTATTGAAGGTGCCAAATCAATTTTTAAGTCAACCCTTTCAGGAATTAAGACCATATCCAAATACGAAGAAAACATCTGCGAACTCCAAGAAGAGATTTCAGAACTCAGGGCCAAAAAGATGTCAATCAAACAAGCGGTCAACATAGCCATAATGGAAGGAAAAACTCCAAAACATCAAGTAAACGTATGGTTAAGGAAGGTTTCTCGAACTGAAGATGCTGTAAGGACACTGTTAGAAATCCATGATGAATATGTTAATGGGAGAGGCTCCAAGATGCTGTACTGGGGCCTACAATCATGGAGGGTGGCAACGAAACTGGAGGATGTGAAAGAGCTCAATTCTACTCATTTTGAAACTGTCGCCCCTGAAAGATATCCTCCAATAAAAGCGGTGGAGAAAATGTCAGTGTCATCTCTTGTCGGGCAGCGGGCAGCTTCAGATATGAAGAAGCTTCTGGAAATCGTGAACAATGATGACATCAGAAGATTTGCGGTCTGGGGGAAAGGTGGGATAGGGAAGACAACGTTGGTCAAGAACTTGATCAATCACCTCTACAATTCCTCTCCAGATTCTTTTAATATCGTCATCTGGGTTCAAGTCACCAGGGAATTTAATTTGAGAAAAATTCAGTCTCAAATTGCCGAGAGACTTCGTTTGAAAATTGAAGAAGGAGAGACCACTCACAGTTTAGCTAACAGAATTCTTGAAAGACTGAAGATGAGGGTGGAAGCTAGCAGAAAGTGTTAG 765 41.83 MDASAVIEGAKSIFKSTLSGIKTISKYEENICELQEEISELRAKKMSIKQAVNIAIMEGKTPKHQVNVWLRKVSRTEDAVRTLLEIHDEYVNGRGSKMLYWGLQSWRVATKLEDVKELNSTHFETVAPERYPPIKAVEKMSVSSLVGQRAASDMKKLLEIVNNDDIRRFAVWGKGGIGKTTLVKNLINHLYNSSPDSFNIVIWVQVTREFNLRKIQSQIAERLRLKIEEGETTHSLANRILERLKMRVEASRKC 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04734 254 Coils Coil 24 44 - -
Cich4g04734 254 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 21 245 IPR050905 -
Cich4g04734 254 Pfam NB-ARC domain 155 245 IPR002182 GO:0043531(InterPro)
Cich4g04734 254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 245 IPR027417 -
Cich4g04734 254 Gene3D - 135 254 IPR027417 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04734 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1664462 Cich Cich4g04734 Cich-Chr4:135798395 Cich4g04735 Cich-Chr4:135835371