Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04738 | ATGGAGTCGATAATTGCGAGGGCGCTGGAGTATACTCTTAAGTACTGGCTTAAATCTTTCACCAGAGATCAGTTCAAGTTACAAGGACGGACTGTTCAGCTCTCCAATTTAGATATAAACGGTGATGCGTTGCACGCAAGTCTTGGATTGCCTCCGGCTTTGAATGTTACAACCGCGAAAGTCGGGAAGCTAGAAATTATACTTCCTTATTTGAGCAATGTACAAGTTGATCCTATTGTTGTGCAAATCGATAAGCTCGATTTGGTATTGGAAGAAAATGATGATTTGGATGCATATAAGAGCACAGACAGTGCACAAGCGCCATCCAGTCCTGCAAAAGGTAGCGGTTATGGATTCGCAGACAAGATTGCAGATGGGATGACATTAGAAGTAAGGACTGTCAATCTTTTACTTGAGACTCATGGTGGTGCTAGACGTCGTGGAGGGGCAACTTGGGCATCACCAATGGCATCTATTACTATACGCAACCTCTTGCTCTATACCACTAATGAGAACTGGCAGGCTGTAAATCTTAAAGAAGCCAGGGACTTTTCATATGACAAGAAGTTCATCTACGTGTTCAAAAAGCTTGAATGGGAGCATCTATCAATCGACCTCTTGCCTCACCCTGATATGTTTGCAGCATTTTCTGAAGGTGCATTTAAGGATGATGATGGTGCAAAGCGAGTTTTTTTTGGTGGTGAGCGGTTTCTTGAAGGAATTTCAGGAGAAGCTTATATTACAATACAAAGAACAGAGCTTAACAGTCCACTAGGGTTAGAACTTCAAGTGCATATTAATGAAGCCGTGTGTCCAGCTTTAAGTGAACCAGGCTTACGAGCTCTTCTTCGATTCTTTACGGGATTGTATGTATGTTTAAATAGGGGAGACATGAATCCAAATGCTCAAGAGCGATCTGCTGAAGCTGCAGGGCGTACACTAGTTTCCATTATGGTGGACCATATATTTTTTTGCATCAAAGATACTGACTTCCAGTTAGACCTTTTAATGCAGTCACTTCTCTTTTCTCGGGCAAGCCTTTCTGATGGAGAAATCACCAAATGCTTAACTCGGGTCATGATAGGTGGACTATTTCTGCGGGACACTTCCTCTCGCCCACCATGCGCATTAGTACAACCATCAATGCAGAATGCCGCAGAGGAACAACTACACATTCCAGATTTTGGAAAGAATTTCTGTCCTCCAATATATCCATTAGGTGACCACCAATGGAAATTAAGTGACCGTGCTCCACTAATATCCCTCCATTGTCTTCAATTTCTGCCCTCACCTACCCCACCATCATTCTCTACACAAACCGTCATCGACTGCCAGCCTCTTATGATACATCTACAAGAGGAATCTTGTCTAAGAATCTCGTCTTTACTAGCAGACGGAATCATGGCTAATTCCGGTGACATTTTACCGGATTTTTCAATCAACTCCCTTGAATTAAACATCAAAGGAATAGACATCACAATTCCACTCGATAATCAAAAATCCAAGTACCCTTCATTTGATAACTCCTTTACTGGAGCAAAACTTCATATTGAAAACTTATTTTTTCACGAGTCACCTTCCTTGCGACTCAAGCTACTCAACCTCGAAAAAGACGCCGCTTGTTTCTGTCTATGGAAAGGACAACCAATCGATGCTAGCCAGAAAAAATGGACAGGTGGCGCTTCTGTCCTTAATCTGTCTCTTGAAACATGTATTAAGAACGGAATCAACAATTCCGGTTTCCAATCTTCGGAATTGAGGTGTGTAGAAGTGAAAGACGCGTGCATTCAAGTAGCAATGGTAACAGCGGACGGGGCACCTTTAACCGATGTCCCACCGCCAGGTGGCATTGTTAGAGTAGGAATTGCGTGTGAACAATATCAGTCAAACACTTCCGTTGACCAACTGTTTTTCGTATTGGATCTATATGCGTATTTCGGTATAGTCAGTGAGAAGATGGCCATGGTTGGAAAAAGTAAAAGAAAAAAAGCGGTGAAAATTGACGGAAATTTAATCGAAAAAGTTCCCGGTGATACCGCGGTTAGTTTAGCAGTTAAAAACCTACAGCTAACCTTTCTAGAGTCTTCCATTCAAGAAATAATGCCCTTAGTTCAATTTTTCGGGGAAGATCTTTTCATGGAAGTTACACATAGAACCCTCGGTGGTGCAATGGCAATTTCGTCAATTTTAAGGTGGGACAAAGTCCAGGTGGACTGTGCTGAAACCGAAAATGGTAACGAAATTTGTCTCCCTAAATTGAGACCTGTATTTTGGGTGCAAAAAGGAAGGAATCGTGACCCGTTTTTGAATTTACGAATGGTGCATGTTATTCCATATAATTCAAAGGATGCAGAGTGTCATAGTGTAAGTTTGTCAGCTTGTGTCGCGGGTGTACGTTTAGCAGGTGGGATGAACTACACCGAATCGCTACTCCACCGGTTTGGGATTTTAGGACCGGATGGTGGACCCGGGGTTGGGCTTACTAAAGGTTTGGACCGTTTATCCGCGGGCCCGTTTTCAAAGCTTTTCAAACCGTCAACTCATAAAAGCATAGACGAGAAGGATAGTGGTTACTTGCAGTTGGGTGCGCCTGATGACGTGGACGTATCGTTGGAATTGAAGGACTGGTTATTTGCGTTGGAAGGTGCTGACGTGGCGGAAAGATTGTTTTTTAATAGAGAAGAGAGATCATGGCACACGACTTTTGAGAGTTTTAAAGTTAAAGCAAACAGCAGGAAGAGTACCTCGGTGAATGGGAAGAAGAATTCAAAGCATCCTGTTGAGTCGGTGACGGTTGGTGTTGAAGGGTTGAAGACATTAAAACCCCAGCAACATAAGGGAGATGTACAAACAAATGGGCACAAGGAAACTGCTGAGTCATCACACGGTGGGGTGGATCTTGAAGCTGACATCGTGTTATCTGAAGACGATGGTGTTAATGAAGTAATTAAGTGGGTAGTGGAAAGTTTAAAATTTTGTGTGAAACATCCGGTCGAGGCAATTGTAACTAAAGATGAGCTGTCACATGTTGCTAAACTATGCAAGTCAGAAGTTGATTCCATGGGGCGAATAACTGCTGGGGTTTTGCGTGTTTTGAAGTTAGAAGGATCAATTGGTGAAACAGCAATGGATCAACTAAGCAACCTTGGAAGTGAAGGGTTTGACAAGATTTTCTCACCAGGGAACCATAGTAATGGTTCTTCCTTAGTGGCTTCAGATAACCAACATTCTTCTTCATCTTTCAATTCAATATTAACTTCACTTGAGGCGACATTATTGGATACACAGACCAATTGTGCAGCTCTTACTGCTAACTTGAGCGGTTCTGAATCTATGAATCCACACCTTCATAGTGTACAAGAACTTGCACAGAAACTAGAGAGCATGCAGAAATTATTGGCCAAGTTGCAGACTCAACTCTAA | 3423 | 42.51 | MESIIARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYLSNVQVDPIVVQIDKLDLVLEENDDLDAYKSTDSAQAPSSPAKGSGYGFADKIADGMTLEVRTVNLLLETHGGARRRGGATWASPMASITIRNLLLYTTNENWQAVNLKEARDFSYDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFSEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQVHINEAVCPALSEPGLRALLRFFTGLYVCLNRGDMNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFQLDLLMQSLLFSRASLSDGEITKCLTRVMIGGLFLRDTSSRPPCALVQPSMQNAAEEQLHIPDFGKNFCPPIYPLGDHQWKLSDRAPLISLHCLQFLPSPTPPSFSTQTVIDCQPLMIHLQEESCLRISSLLADGIMANSGDILPDFSINSLELNIKGIDITIPLDNQKSKYPSFDNSFTGAKLHIENLFFHESPSLRLKLLNLEKDAACFCLWKGQPIDASQKKWTGGASVLNLSLETCIKNGINNSGFQSSELRCVEVKDACIQVAMVTADGAPLTDVPPPGGIVRVGIACEQYQSNTSVDQLFFVLDLYAYFGIVSEKMAMVGKSKRKKAVKIDGNLIEKVPGDTAVSLAVKNLQLTFLESSIQEIMPLVQFFGEDLFMEVTHRTLGGAMAISSILRWDKVQVDCAETENGNEICLPKLRPVFWVQKGRNRDPFLNLRMVHVIPYNSKDAECHSVSLSACVAGVRLAGGMNYTESLLHRFGILGPDGGPGVGLTKGLDRLSAGPFSKLFKPSTHKSIDEKDSGYLQLGAPDDVDVSLELKDWLFALEGADVAERLFFNREERSWHTTFESFKVKANSRKSTSVNGKKNSKHPVESVTVGVEGLKTLKPQQHKGDVQTNGHKETAESSHGGVDLEADIVLSEDDGVNEVIKWVVESLKFCVKHPVEAIVTKDELSHVAKLCKSEVDSMGRITAGVLRVLKLEGSIGETAMDQLSNLGSEGFDKIFSPGNHSNGSSLVASDNQHSSSSFNSILTSLEATLLDTQTNCAALTANLSGSESMNPHLHSVQELAQKLESMQKLLAKLQTQL | 1140 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04738 | 1140 | PANTHER | UNCHARACTERIZED | 1 | 744 | IPR026728 | - | |
| Cich4g04738 | 1140 | MobiDBLite | consensus disorder prediction | 943 | 962 | - | - | |
| Cich4g04738 | 1140 | Pfam | VPS13-like, N-terminal | 1 | 102 | IPR026854 | - | |
| Cich4g04738 | 1140 | Coils | Coil | 1119 | 1139 | - | - | |
| Cich4g04738 | 1140 | MobiDBLite | consensus disorder prediction | 948 | 962 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04738 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63060 | Cich4g04738 | Cich9g00120 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1666158 | Cich | Cich1g01744 | Cich-Chr1:34686116 | Cich4g04738 | Cich-Chr4:135874064 | |
| 1674439 | Cich | Cich9g00120 | Cich-Chr9:3235920 | Cich4g04738 | Cich-Chr4:135874064 | |
| 1674948 | Cich | Cich9g02202 | Cich-Chr9:54818003 | Cich4g04738 | Cich-Chr4:135874064 | |
| 1681016 | Cich | Cich4g04738 | Cich-Chr4:135874064 | Cich9g00119 | Cich-Chr9:3225897 |