AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04797 ATGGCGCTCCCTTCTCCTTCATCCACGTTTACCTGCAAAAACCAGTTCGCGATAACCCTAATCTGCATCTTCATCGTTACTTGTACCCACAGTCCCCGAGTACAAGCCTTTAAAGCACCAATCAGACCACAAGACATACTCCCACTTTTGCCCCGCCAAGTTTCATGGCCTCTTCTCAACACTTTTCGAGGCGCCGCCGATCTTATGCCAAGCTTCGTCGGGGCAGCGCCTATTGCAAATAATTCGTTGTTGAATTGGAAAGGGTCTTGCTTTTATGAGAATACTGCGTGGTTAGAGCTTCATAACAAAAGTGGTAGTGAATTTGGTGGAGGCACTCTTCATATTAAGGTAAGCAAGGCACACAGTTGGACATGTATGGATATTTACGTGTTTGCCACTCCATATCGTGTGACATGGGACTACTATTTCATATCTCGTGAGCATACACTCGAGTTCGATGAATGGAGTGGAAAAGCCGAGTATGAATATGTAAAACGTAAAGGAATTGCAATTTTCCTGATGGAAGCCGGGATGATAGGAACCCTACAAGCCTTATGGGAAGTTTTCCCCCTTTTCACAAATACGGGTTGGGGTGAAAGTTCGAATCTTGCTTTTCTTAAAAAACATATGGGAGCTAAATTTGAAGAGCGACCCGGCCCATTTGTAACAAACATTACGGTTGATGATATTCACTCGGGTGACTTTCTTGCAATATCAAAGATCCGCGGGCGATGGGGCGGGTTTGAGACCCTTGAGAAATGGGTATCCGGGGCGTATGCGGGTCATTCTGCTGTTTGTTTGAGAGACCCGGAAGGGAATTTATGGGTTGGGGAATCCGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTGCCATGGGACGAGTGGTGGAATTTTGAGTTGACCGAAGATGATTCAAATCCGCATATTGCATTGCTTCCTTTGCATCCTGACCTTCGCGCTAAATTTAATGAGACTGCAGCATGGGAATACGCACAAAGCATGATAGGGTTGCCATATGGTTACCATAATTTGATTTTTAGCTGGATAGATACCATCAGCGATAATTATCCACCACCACTGGATGCTCATCTGGTTGCTTCCGTTATGACAGTGTGGAATCAACTGCAGCCTGCATACGCGGCTAATATGTGGAATGAAGCCTTGAATAAGCGTCTTGGTACAGAGGGGCTTGACCTTCCGGATATTTTAGTTGAAGTTGAAAGGCGTGGTTCATCTTTTGCTGAATTGCTAACCATTCCCGAACAAGATGACTGGGTATACGCGGATGGAAAGTCAACTTCTTGTGTGGCTTTTGTCCTTGAAATGTACAAAGAAGCGGGACTCTTTGGAGATCTTGCAAGTGAAATCCAAGTTACCGAGTTCACGATAAAGGATGCTTACATGCTCAAATTTTTTGAAGACGATTCGAGTCGTTTGCCAAAGTGGTGTAATGAAGGGGACACAGTAGAGCTTCCATATTGTCAAATTAAAGGGAAGTATCGAATGGAACTACCGGGATACAATACTATGGATCCGTACGCTCATATGACCGAAACTTGCCCGTCACTACCCCCGGACTATTTAAGACCGGAATACTGCTAA 1611 44.82 MALPSPSSTFTCKNQFAITLICIFIVTCTHSPRVQAFKAPIRPQDILPLLPRQVSWPLLNTFRGAADLMPSFVGAAPIANNSLLNWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSKAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSGKAEYEYVKRKGIAIFLMEAGMIGTLQALWEVFPLFTNTGWGESSNLAFLKKHMGAKFEERPGPFVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPEGNLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNQLQPAYAANMWNEALNKRLGTEGLDLPDILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLASEIQVTEFTIKDAYMLKFFEDDSSRLPKWCNEGDTVELPYCQIKGKYRMELPGYNTMDPYAHMTETCPSLPPDYLRPEYC 536
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04797 536 PANTHER OS01G0793500 PROTEIN 16 536 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04797 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
63068 Cich4g04797 Cich9g00100
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1644177 Cich Cich3g00140 Cich-Chr3:3781795 Cich4g04797 Cich-Chr4:136518579
1651168 Cich Cich4g04797 Cich-Chr4:136518579 Cich9g00100 Cich-Chr9:2951579