AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04805 ATGGGTTGGAGGAATGGAGGAGAGTTTCAAAACGAAGAAGATGAAAGAAGATCGCCATCATCACCACTTGTAAACGATGCGTTGCTTTTTACAACCATGTGTATCATTGGCCTCTCTGTTGACGTTCACATCAAAGATGGGTCCATTTATTCTGGAATCTTTCACACTGCTTGTGTTGACGACCGTTATGCTATTGTATTGAAGCAAGCAAGAATGATGAAGAAGGGAAGTTGTGATTCAAATGTAGCAAATGAGGGCGTTATAGGAACTCTAGTAATCCAGTCAGAGGATCTTGTCCAAGTGGTTGCAAAGAGAGTATTGCTTCCAGCAGATGGTTTTGCTGGACACGAGACCAGGAATGATACAGGGGCTGTTGCATGCTCTTTTCCTTCTAATGATACTCAATGGACTGAAGCAAATAAAACAGCTCCAAAAAAGTCAAACGTTGACCAACCACAAGCTACTCAAACAAGATGCTTGTCTGGAACTGAGAACGGGGTTCCGATTCAGTCAACTAATTCTGTTGAAGTCGATAAAAATGCAGACATTGAAGGTTCAACGAAGAAGGAAGAAGCTATGAAGGATTCAGATGATAAGAGAAAGAACGGAGGTTATAACAACGGAGTTAAAACCGATAACCATAAGGAATCAATTGTGAGTTCGTCATCAACTCCAACTGAAATCGTCACTTCAAAAATCCCAAATTCCAATCGAACCGCTAAGGAATTTAAACTTAACCCTGGAGCAAAGATATTTTCTCCATCGTTTCCAAATAAAAGATCTGCTACCGCCGGATCAAATCTTGCATACGTGCCCGACGGTTATCCGGCGGTACAGGTGGCGGCGGCACCACCACCACAGCCGGAAGTGGAAATGAGCCCCACCCCCGGCCCGTATGCTCCTCGTTCTTTACCGGTTAAGTTTGTTCCTTATGGTAATGTACTTTCGGGAAACGGAGGAGGCGATATACAACACCCTCCACCTATTGTTGGATATATGACGAATAGGGCACAACCGGTCAGATATAGTGGTCAATATCATCCGGTCCAAACCGCGCCGACTTATGTCCAACCGGGATCTCCAAATGTAATGGTTGGAAGATTGGGACCGGTTGTCTATGTCCATCCTGTTTCTCAAGACATGGTCCCAAGCACGACTGGTTTCCCTCAAATGTCTACGTGCTCTATTATAACTCCGCACCAAGTCCATGTACCTAAACACCAAGGAACTGCAGCAGCCCAAGCATTGCAGCTATGTGCAACACCACCATTTATTGCCGCCGGTGGTCAAACCCCGTTTATGTTACCGGGCCACATTCCGATTTCACAACCGCCTTACCCAATGATCCGCCCGATGCCGGTCCCTGGATCTAATGGTTTTTTGGTATCAAAGTTTTCTTGA 1401 45.25 MGWRNGGEFQNEEDERRSPSSPLVNDALLFTTMCIIGLSVDVHIKDGSIYSGIFHTACVDDRYAIVLKQARMMKKGSCDSNVANEGVIGTLVIQSEDLVQVVAKRVLLPADGFAGHETRNDTGAVACSFPSNDTQWTEANKTAPKKSNVDQPQATQTRCLSGTENGVPIQSTNSVEVDKNADIEGSTKKEEAMKDSDDKRKNGGYNNGVKTDNHKESIVSSSSTPTEIVTSKIPNSNRTAKEFKLNPGAKIFSPSFPNKRSATAGSNLAYVPDGYPAVQVAAAPPPQPEVEMSPTPGPYAPRSLPVKFVPYGNVLSGNGGGDIQHPPPIVGYMTNRAQPVRYSGQYHPVQTAPTYVQPGSPNVMVGRLGPVVYVHPVSQDMVPSTTGFPQMSTCSIITPHQVHVPKHQGTAAAQALQLCATPPFIAAGGQTPFMLPGHIPISQPPYPMIRPMPVPGSNGFLVSKFS 466
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04805 466 MobiDBLite consensus disorder prediction 1 21 - -
Cich4g04805 466 PANTHER ATAXIN 2-RELATED 143 453 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Cich4g04805 466 MobiDBLite consensus disorder prediction 140 230 - -
Cich4g04805 466 MobiDBLite consensus disorder prediction 181 205 - -
Cich4g04805 466 MobiDBLite consensus disorder prediction 206 230 - -
Cich4g04805 466 Pfam Ataxin 2 SM domain 25 104 IPR025852 -
Cich4g04805 466 MobiDBLite consensus disorder prediction 140 180 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04805 - -