Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04832 | ATGTCGTTTCCGATTTTTGATTATAATATATACCTATCAAATGGGATTAATCTTAAGGCAAAAGAGGACGATTCACCGGCTCCTGTTGAGGTGAATAACAATATTATTCCATCAGCAACCGTGCTCAAGCAATTAGCCATAGGTTTTCAGACAACAAAAGTTATAAGGTCGATGAAGGATCTTTTGGTATCATCAAGAGATTCATTACCTGTGAAGGAGAGATCTGGTTTGAGCTTATCCGCTATGAAGTCATTCGTAGTGGGGGAGAGAGAAGAAGATAAGTTTATTTCTGAGTTCGGTCGTAATGAAAAAGTAATGTCTTTTATCTATTCACTGCTCGATGCGGAAGGAAATTTTTCTCGAAAGAAATTTGGATCTTCTCTTGGGACGAATAAAAACGTTACTAACTTTTGCAAAGAAATTCATGGTGCTCCTCCCGACAGCATTGTTACAGAGCTCGCTGAAGCTATTGGAAGTTTGAAAACTTTGAGGAAAATGGCATTGTTTTGGTCCACGGTTGTTGGAGAATTGAGAAGGCTATGGTGTGAGGGACAATATATTCCGGGAATCCCTCGAGATAAAATTCCAAACTTAAATTCGTGTCTATTGTATCAGCATTTTCAGGTTATCAATTGCTGTATTTCTAGGAAACAACGGCGTGCTATTGCCACCAAATCATTAGATGCGGTTCTAAAACAAGCCAATCACGATGCGGATCTTTATGCTAAAATCAGTACCGGGGAACGTGTGCTTCGATTAGGAGCTAACAAACGACTTGAGAACACAACGCTTTTGAAAACCGGTGAACCTGTATTCACGCCCGTTATGCAGGAAGGGCCGTTGCTTACAGAAGACGTTATTAAGGAAACGGAGGAACTTGTGCTACGTACTGGGAGTGTTGGTGCGGGGTGTTCTCAGCTTCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCAGGTTGCATATTAGAAGATTTTGTTAGATGGCACTCACCCCCTGACTGGACAGAAACATCGACAGATGATCAAAAAAAAGAATCCGTTATTGGTGGTCTATCTTCTTCTAAAGGACAGCTGAGTTCCCGTATGCAAAAAGAAGGTAATTTATGGCGAGAACTTTGGGAATTTGCAAGACCGTTACCTGCTGTTAAACAGTCTCCATTATACGATGAGGATTTATCAGTGGAAGGTATTTTGCATGGCTTTGAGAACATATCACCTTCTGGTTTCTTTGAGCAGCTGTTTCTTTCTCTTCTTAGTCTGGGATGTACGATTGCCGAGGCCAGAATTTCAAGTAACAAAGATCTATACAAGCTTTTCAAGGAGTGCAAAGAGTACATTGTTATTACTTGTCAAGGCAAAAATTGGGTCGAGAAAGCCGATGATATATGCCAGGTTTATGGGACCGTGGCAATGATGGCATTGTGCCCCAATGGTGTCATAAGGATAACGCCTGATGAGACTCGTGAAAACAATGAACCCAAGGGCAGTTTTGGGAAATTTGGCATCATGTATGGTGGTATGGATAATAGCATGTGGAAAACATCGCGAAATGACCAAAAGAACCAAGAACTCAACACAACAACACAATCGTCTACAACGTTTTCAAAAAAGCCACCAAAACCTCTTGAGAAACAACTTGGTTCTATCGAAATGAAACCTCAATGA | 1668 | 41.01 | MSFPIFDYNIYLSNGINLKAKEDDSPAPVEVNNNIIPSATVLKQLAIGFQTTKVIRSMKDLLVSSRDSLPVKERSGLSLSAMKSFVVGEREEDKFISEFGRNEKVMSFIYSLLDAEGNFSRKKFGSSLGTNKNVTNFCKEIHGAPPDSIVTELAEAIGSLKTLRKMALFWSTVVGELRRLWCEGQYIPGIPRDKIPNLNSCLLYQHFQVINCCISRKQRRAIATKSLDAVLKQANHDADLYAKISTGERVLRLGANKRLENTTLLKTGEPVFTPVMQEGPLLTEDVIKETEELVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTETSTDDQKKESVIGGLSSSKGQLSSRMQKEGNLWRELWEFARPLPAVKQSPLYDEDLSVEGILHGFENISPSGFFEQLFLSLLSLGCTIAEARISSNKDLYKLFKECKEYIVITCQGKNWVEKADDICQVYGTVAMMALCPNGVIRITPDETRENNEPKGSFGKFGIMYGGMDNSMWKTSRNDQKNQELNTTTQSSTTFSKKPPKPLEKQLGSIEMKPQ | 555 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04832 | 555 | Pfam | Rab3 GTPase-activating protein catalytic subunit | 252 | 403 | IPR026147 | - | |
| Cich4g04832 | 555 | MobiDBLite | consensus disorder prediction | 511 | 539 | - | - | |
| Cich4g04832 | 555 | MobiDBLite | consensus disorder prediction | 511 | 555 | - | - | |
| Cich4g04832 | 555 | PANTHER | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT | 29 | 534 | IPR045700 | GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(PANTHER)|GO:0043547(InterPro) | |
| Cich4g04832 | 555 | MobiDBLite | consensus disorder prediction | 345 | 360 | - | - | |
| Cich4g04832 | 555 | MobiDBLite | consensus disorder prediction | 334 | 360 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04832 | K18270 | Rab3 GTPase-activating protein catalytic subunit |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63072 | Cich4g04832 | Cich9g00084 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:136987015 | Cich9g00084 | Cich-Chr9:2611079 | dispersed |