AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04839 ATGAATATTGAAATCGTTGGGCGCCATGCCCTCCTATTCGACGATGATACCACGGCAGCCTTCGTGAACTCGCAAGACGCGCTTGTTGAGTGGAATTCTCTACTAATCGACCGTTATGACGTCCGCCATCTCCTTTTCAGCCCTCCGCCATCTCGGAAGCGGCGCAATCCACAAACCTCGCACTCATCTTCCGCTGATGCGGAAATCGATTACGAGCGGTACCTGGATCTCCCCCCACCTTCCGAGGAAGAAGAAGCAGATGAAAAATCGGAACCTGTGCATGGATTGAATGCTGTTCCTTTTTCTTATGGGAACTATGAAGAATCTAATGATCAAAAGAATGCCGAAGCTGAACCAGAAGGCCCTAGATTTCATCCCCCTTTCCCTGTTCCTGACAGCCTGATTCAGAATTTGATGCTTGGAGCAGGGATCGAGTTTTGA 441 49.43 MNIEIVGRHALLFDDDTTAAFVNSQDALVEWNSLLIDRYDVRHLLFSPPPSRKRRNPQTSHSSSADAEIDYERYLDLPPPSEEEEADEKSEPVHGLNAVPFSYGNYEESNDQKNAEAEPEGPRFHPPFPVPDSLIQNLMLGAGIEF 146
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04839 146 Pfam Alternative splicing regulator 3 97 IPR019147 -
Cich4g04839 146 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 3 138 IPR040397 GO:0000395(PANTHER)
Cich4g04839 146 SMART DRY-EERY-2 1 107 IPR019147 -
Cich4g04839 146 MobiDBLite consensus disorder prediction 46 130 - -
Cich4g04839 146 MobiDBLite consensus disorder prediction 66 80 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04839 - -