Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich4g04849 | ATGAACAAATTGGGCAGAGGGCACCGTGACAAGGTTCAACAGTTCATGACAATTACTGGAGCTAGTGAAAAAGTTGCTCTTCAAGCCTTGAAGGCAAGTGATTGGCATCTTGATGGAGCATTTGATGTGTTCTACAGCCAACCCCACCCCAAAACATTCACAGATACAAGGCATTTAGAGGAACTCTACAATAGATATAAAGATCCTTATGCTGATATGATTATGGCTGATGGTATTAGCACTCTCTGTAATGATCTTCAGGTGGATCCTCAAGATATTGTTATGTTGGTTGTTTCTTGGCACATGAAAGCTGCTACCATGTGTGAATTCTCAAAGCAAGAATTTGTTGGTGGCTTGCAGTCTCTAGGGATAGATTCACTTGAGAAATTTCGCGAACGGATTCCATTTATGCGTTCCGAGCTCAAAGATGATCAAAAGTTTAAGGAGATTTATAATTTTGCATTTGGCTGGGCAAAGGAGAAGGGTCAAAAGTCACTGGCATTGGATACAGCAATAGGAATGTGGCAATTGTTGTTTGAAGAAAAGGAGTGGCCATTGGTTGATCATTGGTGCCAATTTTTACAAGCACGCCATAATAAGGCTATTTCTCGTGACACTTGGTCTCAACTACTTGAATTTGCAAGAAGTGTGGAGCCTACACTAGCTAATTATGATGCTGAAGGTGCTTGGCCGTATCTAATTGATGAATTTGTAGAGTATTTAATAGAGAATGGCATAATTGTGAAGTAA | 750 | 40.13 | MNKLGRGHRDKVQQFMTITGASEKVALQALKASDWHLDGAFDVFYSQPHPKTFTDTRHLEELYNRYKDPYADMIMADGISTLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQSLGIDSLEKFRERIPFMRSELKDDQKFKEIYNFAFGWAKEKGQKSLALDTAIGMWQLLFEEKEWPLVDHWCQFLQARHNKAISRDTWSQLLEFARSVEPTLANYDAEGAWPYLIDEFVEYLIENGIIVK | 249 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich4g04849 | 249 | Pfam | UBA-like domain | 9 | 47 | - | - | |
| Cich4g04849 | 249 | FunFam | Defective in cullin neddylation protein | 143 | 248 | - | - | |
| Cich4g04849 | 249 | SUPERFAMILY | UBA-like | 7 | 46 | IPR009060 | GO:0005515(InterPro) | |
| Cich4g04849 | 249 | Gene3D | - | 52 | 142 | - | - | |
| Cich4g04849 | 249 | ProSiteProfiles | DCUN1 domain profile. | 54 | 242 | IPR005176 | - | |
| Cich4g04849 | 249 | Pfam | Cullin binding | 130 | 240 | IPR005176 | - | |
| Cich4g04849 | 249 | CDD | UBA-DCNL | 8 | 48 | - | - | |
| Cich4g04849 | 249 | Gene3D | Cullin, PONY binding domain | 143 | 247 | IPR042460 | - | |
| Cich4g04849 | 249 | PANTHER | RP42 RELATED | 24 | 242 | IPR014764 | GO:0000151(PANTHER)|GO:0031624(PANTHER)|GO:0032182(PANTHER)|GO:0045116(PANTHER)|GO:0097602(PANTHER) | |
| Cich4g04849 | 249 | Gene3D | - | 6 | 47 | - | - | |
| Cich4g04849 | 249 | FunFam | Defective in cullin neddylation protein | 6 | 47 | - | - | |
| Cich4g04849 | 249 | FunFam | Defective in cullin neddylation protein | 53 | 142 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich4g04849 | K17822 | DCN1-like protein 1/2 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr4:137258874 | Cich9g00166 | Cich-Chr9:4591496 | transposed |