AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04894 ATGAATGGTGAAATTCTTACACAGAAAAAGGTACATGAAATGTACTATATCAGCACAAAGATTGACCTCAAAAGTGGATTACTTCATGTGGAATCTTCTAGATGCAAAGAGAAACTCTCTATTGAACTCAAATCCGATACTTTTTCTGTAGTAGAAGAAATTAATATACATGCTCAAAGGTATGAAGTTTTGGGGTATGATAACAATATTGACGAATGGTTTAGCAAAGCGGTTGGGCGGCCTTGCTATCTGTTAAGATCTAGTTCAAGAAGTTGTAACCGCTTTAACAGAAACAAAAGCATGCCCACATGTAGAGATGTGAATACCAGATTAAATTTTGTGAATGAAGCCCAGATTTTAATGGTGTCTGAAGAAAGCGTATCTGACCTCAATTCTAGACTAGATTCAAACCGGTTTGTTGATCCAATGAGATTCCGCCCTAATCTGGTCATATCTGGTGGTGGGCCGTATGTTGAAGACACATGGAGTGGTCTTAAAATCGGAAAGAATCACTTCACGTCATTGGGCGGGTGCAACCGTTGCCTGATGATTAATTTAAATTATGAAGGAGGCGAGTTACAGAGATCAAATGAGCCTCTAGCTACTTTATCATCATACAGGAGGGAAAAGGGGAAAATACTCTTTGGAATTTTACTGAGATATGAGTGTGACAACCACGTTGGAGAAGAAATATCTTCATGGCTTCAAGTGGGTCAAGAAATACACCCTGATAAAAAGTAA 741 38.46 MNGEILTQKKVHEMYYISTKIDLKSGLLHVESSRCKEKLSIELKSDTFSVVEEINIHAQRYEVLGYDNNIDEWFSKAVGRPCYLLRSSSRSCNRFNRNKSMPTCRDVNTRLNFVNEAQILMVSEESVSDLNSRLDSNRFVDPMRFRPNLVISGGGPYVEDTWSGLKIGKNHFTSLGGCNRCLMINLNYEGGELQRSNEPLATLSSYRREKGKILFGILLRYECDNHVGEEISSWLQVGQEIHPDKK 246
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04894 246 SUPERFAMILY PK beta-barrel domain-like 108 201 IPR011037 -
Cich4g04894 246 SUPERFAMILY MOSC N-terminal domain-like 2 96 - -
Cich4g04894 246 ProSiteProfiles MOSC domain profile. 90 244 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Cich4g04894 246 Pfam MOSC domain 109 241 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04894 - -