AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04942 ATGGCAATTTTCGCGGGAAAATGCATTTATGGTGCTGCATTCGAGCTTCAGTCAAGAGTTTTCTTGAAGCCCTGTAGGGCGACGAGGATTATAGTTCGATGCTGTTCAAATTTGAATGAAAGCTCGGCGAATTTTCCAGTTAGGTACACTCCTAAGAGAGCTTCAAAATATAATAAACTTAACGATTCTACTCCGGCTCCAAAGGATTCCGAGAGCTACGAAGTGCGTCGATTCATAAATTCTGATTCATCGAATGTTGAGTTTTCAAATGCTGGGGAGAGATCCAGGATAGGATATATTTTGAATGGGAAATCACTGGATAAAGATTCTAAGCAAGGTAATGTAAGATCGAAAGAAAACAAATCTAGTAGTTCAGCTGTGAGATCAGAGGTGGGAGAGCATGATTACAAATGGAGATCTACAGAGTCAAATTTTATGGAAGAACTTTATGAATTTGATGCCATGGAAGGTCCTGAGGAGGATTTAGATGAACTTGATTCTCATAATGGAAAATACGAAATCAAACATCCCACACTCGAACCTAATAAAACTAAAGAAGAAGCCGAGAAGACAGCACTTAAATTACTTGCTGCTAGGGCATATACAGCACTTGAGCTGAAGAAGAAACTGATAGCAAAGAAATTCTCCCATGAAGTTGTCAATACTGTGATTTCTGACTTCCAAAACAGAGGATTTATCAATGATCTCTTGTATGCTGAAGCATTTTCTCGATCGAGATGGTCTTCATCAAGCTGGGGTCCACGTAGAATCAAGCAGGCCTTGGCCAAAAAGGGAGTTAATGATTTCGATGCACAAAGAGCAATAAAAGTGGTGTTAGAAGATGCTGAATCTGTTGATGAAGTTTCAAGTTTTGGGTTATCAAAGACCTCGATGGATCATTTATATGTCCAAGCTTCAAAGCAATGGCTTCGTGCTAAAGATTTACCAAGTGAAAAACAAAAATCAAGAATTGTTAATTGGCTTCAATACCGTGGCTTTAATTGGGGCATTATCAACTTCATCTTGAAAAAGTTACAATCCGAGCATCCTCCTTAG 1056 38.92 MAIFAGKCIYGAAFELQSRVFLKPCRATRIIVRCCSNLNESSANFPVRYTPKRASKYNKLNDSTPAPKDSESYEVRRFINSDSSNVEFSNAGERSRIGYILNGKSLDKDSKQGNVRSKENKSSSSAVRSEVGEHDYKWRSTESNFMEELYEFDAMEGPEEDLDELDSHNGKYEIKHPTLEPNKTKEEAEKTALKLLAARAYTALELKKKLIAKKFSHEVVNTVISDFQNRGFINDLLYAEAFSRSRWSSSSWGPRRIKQALAKKGVNDFDAQRAIKVVLEDAESVDEVSSFGLSKTSMDHLYVQASKQWLRAKDLPSEKQKSRIVNWLQYRGFNWGIINFILKKLQSEHPP 351
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04942 351 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 13 350 IPR003783 GO:0006282(InterPro)
Cich4g04942 351 MobiDBLite consensus disorder prediction 108 133 - -
Cich4g04942 351 Gene3D - 234 276 IPR036388 -
Cich4g04942 351 Pfam RecX, second three-helix domain 234 274 IPR053924 -
Cich4g04942 351 Gene3D - 187 232 IPR036388 -
Cich4g04942 351 Pfam RecX, third three-helix domain 299 342 IPR053925 -
Cich4g04942 351 Pfam RecX, first three-helix domain 191 225 IPR053926 -
Cich4g04942 351 Gene3D - 295 350 IPR036388 -
Cich4g04942 351 Hamap Regulatory protein RecX [recX]. 170 349 IPR003783 GO:0006282(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04942 K03565 regulatory protein