AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich4g04963 ATGTTGAGGATCAAGAGGGTTCCTACTATTCTTTCCAACTACCAAAAGGAGGAGGCCGAGGAAGGTGGCGCAAACCGTGGTTGCGGCCGTAATTGCCTCAGAAACTGTTGCCTAACAGGGGCTAAGCTACCTCTGTATGCTTTTCCAAAATCCAACAAGGTTGATTTCTGCAACAATAATGAGGTCCCTTTTGCCTTCTTGGACTCCCTTCTTCTAGGAGAGTGGGAGGATCGCATGGAGAGGGGCCTATTTCGCTATGATGTAACTGCTTGTGCGACTAAGGTGATTCCAGGTGAACTTGGTTTTGTGGCTCAGCTGAATGAGGGCCGCCACCTCAAGAAACGACCCACTGAGTTCCGAGTTGACAAGGTGCTTCAGCCTTTTGACGAGAATAAGTTCAACTTTACCAAAGTTGGTCAAGAGGAAGTGCTCTTCCAGTTTGAAGCAAGTGAAGATGGCGAAGTCCAGTTCCATCCATATGCTCCAATCGATGTGGACAGATCACCAAGTGTAGTCGCCATTAATGTTAGCCCCATTGAATACGGACACGTGCTTCTGATCCCTCGAATTCTTGAGTGCTTACCTCAAAGGATTGACCACGAAAGCTTATTACTGGCACTGTACATGGCACGTGAAGCTGGAAGTCAATACTTTCGTCTAGGTTACAACAGCTTGGGGGCATTTGCCACCATCAATCACCTTCACTTCCAGGCTTACTACTTGAGCGTGCCATTTCCACTTGAGAAAGCTCCCACTAGAAAGATTACCGACTTGAATGGCGGGGTGGTAATTTCTGAGATTCTCAACTATCCTGTCAAGGGTCTTGTCTTTGAAGGTGGAAACTCTATTGAAGATTTATCGAATGCTGTGGCGGATTCTTGCATATGCCTTCAAGACAACAACATTCCTTACAATGTGCTCATTTCAGATTCTGGTAGACGTATCTTTGTCCTTCCTCAGTGTTATGCAGAGAAGCAGGCTCTTGGAGAAGTGAGTGGTGAGCTTCTAGACACGCAGGTGAATCCAGCAGTGTGGGAAATTAGTGGACACATGGTGCTAAAAAGGAAAGAAGACTATGAAGGGGCATCTGAGGAAAAAGCTTGGAGACTTCTTGCTGAGGTGTCATTGTCTGAAGAAAGGTTCCAGGAAGTGGTGGCGATTATATTTGAGGCGATTTCGTGTGAGAAGATGTTGACCCAAGACGAACAAGATGTTGACCCAGTTGGTGGTGTGGACAATGGGCCTCCTGCAGCCATGGTGTCTGGGAATCAAGAGTGCCTGGTTCAACACTAG 1293 47.02 MLRIKRVPTILSNYQKEEAEEGGANRGCGRNCLRNCCLTGAKLPLYAFPKSNKVDFCNNNEVPFAFLDSLLLGEWEDRMERGLFRYDVTACATKVIPGELGFVAQLNEGRHLKKRPTEFRVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDGEVQFHPYAPIDVDRSPSVVAINVSPIEYGHVLLIPRILECLPQRIDHESLLLALYMAREAGSQYFRLGYNSLGAFATINHLHFQAYYLSVPFPLEKAPTRKITDLNGGVVISEILNYPVKGLVFEGGNSIEDLSNAVADSCICLQDNNIPYNVLISDSGRRIFVLPQCYAEKQALGEVSGELLDTQVNPAVWEISGHMVLKRKEDYEGASEEKAWRLLAEVSLSEERFQEVVAIIFEAISCEKMLTQDEQDVDPVGGVDNGPPAAMVSGNQECLVQH 430
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich4g04963 430 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 3 395 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich4g04963 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
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Event-related genes

Select Gene_1 Gene_2 Event_name
63105 Cich4g04963 Cich9g00077
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr4:140958894 Cich7g03199 Cich-Chr7:102567155 dispersed
Cich Cich-Chr4:140958894 Cich9g00077 Cich-Chr9:2513505 wgd