Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich8g01666 | ATGGAAATGCAAAACGACTTCGATCGCCTTCTCTTCTTTGAGCATGCTCGCCGGAGTGCCGAAGTGACTTACGCGAAAAATCCTCTCGATACCGAGAACCTAACCAGATGGGGAGGGGCGTTGCTCGAATTGTCGACCTTCCAGAGTGTTCAGGAATCAAAATCCATGATTAAAGATGCTATATCAAAATTGGATGAAGCATTATCAATCGATCCAAGGAAACATGACGCCTTGTGGTGTATGGGCAATGCACAAACTTCTTACGCTTTTCTGACTCCCGATAAAGATGTAGCCAAGGGCTATTTTGACTCGGCGTATACTTACTTTCAGCAGGCTCTCGAAGAGGATCCAGGGAATGAACTTTACCGCAAATCATTTGAAGTTGCTGTAAAGGCTCCTGAATTACACTCAGATCTTCATAAACAAGCTTCTAGTCAACAAGCCATGGCATCAGGGTCAATAGGAGGTCCTTCAACTTCTTCAAGTGTCAGGGGTCCAAAAGCGCAAAAGAGTAGTGATTTGAAATATGATATATTTGGATGGGTTATTCTTGCGGTTACTATTGTGGCTTGGGTTGGATTTGCTAAATCAAATGTACCTTCACAACCGCCTCGATAA | 618 | 43.69 | MEMQNDFDRLLFFEHARRSAEVTYAKNPLDTENLTRWGGALLELSTFQSVQESKSMIKDAISKLDEALSIDPRKHDALWCMGNAQTSYAFLTPDKDVAKGYFDSAYTYFQQALEEDPGNELYRKSFEVAVKAPELHSDLHKQASSQQAMASGSIGGPSTSSSVRGPKAQKSSDLKYDIFGWVILAVTIVAWVGFAKSNVPSQPPR | 205 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich8g01666 | 205 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 7 | 196 | - | - | |
| Cich8g01666 | 205 | Gene3D | Tetratricopeptide repeat domain | 1 | 150 | IPR011990 | GO:0005515(InterPro) | |
| Cich8g01666 | 205 | MobiDBLite | consensus disorder prediction | 140 | 168 | - | - | |
| Cich8g01666 | 205 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 204 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) | |
| Cich8g01666 | 205 | SUPERFAMILY | TPR-like | 13 | 124 | IPR011990 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich8g01666 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:1317997 | Cich8g01666 | Cich-Chr8:55306082 | dispersed | |
| Cich | Cich-Chr3:44231648 | Cich8g01666 | Cich-Chr8:55306082 | dispersed | |
| Cich | Cich-Chr6:24740182 | Cich8g01666 | Cich-Chr8:55306082 | dispersed | |
| Cich | Cich-Chr7:78850022 | Cich8g01666 | Cich-Chr8:55306082 | dispersed | |
| Cich | Cich-Chr7:104547959 | Cich8g01666 | Cich-Chr8:55306082 | dispersed | |
| Cich | Cich-Chr8:55306082 | Cich8g00294 | Cich-Chr8:7361987 | transposed |