Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich8g01704 | ATGACCATAAACCTCTCTTTCACCCCTTATCGGACGAATTCGCCGCTCGTTCACCATCACAACTCTTTTCCCTTTAATCAGTTTAATTATCTTTCAAAAGTTTCCTTACCGTTATTAGCTACAATGGGCGGTACATTCAATCCACAAATTTTGGTGGAAAAGCTTGCGAAACTCAATAGTTCACAACAAAGCATCGAGACTCTGTCACACTGGTGTATATTTCATATGAACAAAGCAAAACAAGTTGTGGAAACATGGGCACGACAATTTCGATGTTCCCCACGTGATCAACGTTTGGCTTTTCTTTATCTTGCAAATGATATTCTGCAAAATAGTAGGCGAAAAGGTTCCGAGTTTGTTGGAGAGTTCTGGAAGGTTCTTCCGGATGCACTCCATGATGTGATGGATAATACGGATGATTCCGGAAGAAACGCGGCTTTACGACTGGTCAAGATTTGGGAGGAAAGAAAAGTTTTTGGGTCACGGGGGCAGATTCTTAAAGAAGAACTTGTGGGAAGGCACGTAGGAAATAGTAACAAAAATGAGAAACCCTCAGGGGTAAAATCGCAACAACTTGCTGGAAATTCATTAGAGAAGATAATATCAGGGTATCAAATTATAAATGGTGGTCAACTTGATGAAGATGCTATGATTAATAAATGCAAAAACACAATTAGCTGCATTGAAAAAGTGGAGAAGAAATTTGGTGGTGATATTAAATCTGTGAATGGGTTGGGTATTGTGGAAGAACTCAAGGGGCATCAAACTACATTGAAAGATTGTATTGAGCAACTTTCAGTTGTAGAATCATCAAGAACTAATCTCGTTTGTTATTTGCGTGAGGCTTTACAAGAACAGGAAATGAAGCTGGATAAAGTCCGAAATGAACTTAAGGCTGCTCATAATCAATCAGAAAAAACCGACAATTTATGCCGCCAGTTGATAAACCCCGGTGCCACCAAATTACTCCCGGAGCCGACCACAACCACAACCACCACCCAACTCCACAATTACATTCCCGGAACCCGAGAACAGTCTGCACCGGTAATGTACACCCAACAAATTCCAATCACTGAGGAGGAAGCCACCAAATCTGCCGCCGCCCAAGTGGCGGCAAAGCTCACCGCCTCCACATCATCCGCCGAGATGCTCTCCTACGTCCTCTCTTCCCTAGCATCCGAGGGCATTATCGGAAATTCCGCTAAAGAATCATCCTCAACCAACCCTGAAAAAAGAGCCAAGATCGAGAAAAGCGACCACCACCACCAACCACCGCTGCCGTCATCTCCGCCACCTCTACAGCCGCTGCCGCCAATGCAAGCGTATCCACTGCCGCCGTTCATGGCGGCAGTACCGTATAGCTATAACCAGCAACCGCCGCCGCCGCCTCTTTTGGGGTATCCCGCTGTTGTGCCACTGGTGAACAGTGGTTCTTCTTATACTCCGGTGGTTGTGCCGCCACCGGGCGGTTACCAGAGTTATCAAATGGAAGGTGGGTTTACTAGCCAACCGATGGCACCTATGTCTAGACAGTAG | 1536 | 45.51 | MTINLSFTPYRTNSPLVHHHNSFPFNQFNYLSKVSLPLLATMGGTFNPQILVEKLAKLNSSQQSIETLSHWCIFHMNKAKQVVETWARQFRCSPRDQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALHDVMDNTDDSGRNAALRLVKIWEERKVFGSRGQILKEELVGRHVGNSNKNEKPSGVKSQQLAGNSLEKIISGYQIINGGQLDEDAMINKCKNTISCIEKVEKKFGGDIKSVNGLGIVEELKGHQTTLKDCIEQLSVVESSRTNLVCYLREALQEQEMKLDKVRNELKAAHNQSEKTDNLCRQLINPGATKLLPEPTTTTTTTQLHNYIPGTREQSAPVMYTQQIPITEEEATKSAAAQVAAKLTASTSSAEMLSYVLSSLASEGIIGNSAKESSSTNPEKRAKIEKSDHHHQPPLPSSPPPLQPLPPMQAYPLPPFMAAVPYSYNQQPPPPPLLGYPAVVPLVNSGSSYTPVVVPPPGGYQSYQMEGGFTSQPMAPMSRQ | 511 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich8g01704 | 511 | MobiDBLite | consensus disorder prediction | 407 | 423 | - | - | |
| Cich8g01704 | 511 | ProSiteProfiles | CID domain profile. | 43 | 175 | IPR006569 | - | |
| Cich8g01704 | 511 | PANTHER | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN | 43 | 500 | - | GO:0000993(PANTHER)|GO:0031124(PANTHER) | |
| Cich8g01704 | 511 | MobiDBLite | consensus disorder prediction | 399 | 440 | - | - | |
| Cich8g01704 | 511 | Gene3D | - | 43 | 171 | IPR008942 | - | |
| Cich8g01704 | 511 | MobiDBLite | consensus disorder prediction | 424 | 440 | - | - | |
| Cich8g01704 | 511 | Coils | Coil | 280 | 310 | - | - | |
| Cich8g01704 | 511 | FunFam | ENTH-VHS family protein isoform 1 | 43 | 171 | - | - | |
| Cich8g01704 | 511 | Pfam | CID domain | 50 | 161 | IPR006569 | - | |
| Cich8g01704 | 511 | CDD | CID-RPRD-like | 48 | 170 | - | - | |
| Cich8g01704 | 511 | SMART | 558neu5 | 50 | 171 | IPR006569 | - | |
| Cich8g01704 | 511 | SUPERFAMILY | ENTH-VHS domain | 53 | 158 | IPR008942 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich8g01704 | K15559 | regulator of Ty1 transposition protein 103 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63405 | Cich6g01690 | Cich8g01704 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr8:56903644 | Cich9g02942 | Cich-Chr9:88387766 | dispersed | |
| Cich | Cich-Chr4:20561359 | Cich8g01704 | Cich-Chr8:56903644 | transposed | |
| Cich | Cich-Chr6:24522932 | Cich8g01704 | Cich-Chr8:56903644 | wgd |