AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cich8g01710 ATGGCGGTCAAGACGGCGGTGCAGTTCTCCGACGTGCCACTTCTCGATCAGGTCAACGACAACGTCGCCTCGTTGTCTCTTTACGCCACTCGGCTTCCCACCGCCGCATTGGAAGTGAACATTGGCCGGAAAAGTGTACCTAAATTCATGGTGGTCGGTCACAGAGGTCATGGCATGAACGTCTCGACGGATAAGAGATTGAATGTTTTTAAAGAAAATTCCATTATTTCATTCAATAATGCTGCCAATTATCCTCTCGATTTCATCGAATTCGACGTTCAGGTGACAAAAGACGACATACCAATCATTTTCCACGACAATTTCATCTTCACCAAAGAGAATGGTGTCGTAGTTGAAAAAAGGGTTACCGATTTGACACTTAACGAATTCTTCAGCTATGGTCCTCAAAGAGTAGCTGGTGTTGTCGGTAAAACTTTGTTTCGTGAATCAAACGGACAGATAGTCGGGTGGAACGTTGAGACCGATGATCATCATTGCACTTTACAAGAAGCTTTCGAAAAAGTAAACCCTGGTTTGGGATTCAACATCGAGTTGAAGTTCGATGATTACATTGTTTACGAACAAGAGTATCTCATCCATACTCTTCAAGTCATCATGAAGGTGGTATACGAATACGCCAAAGGAAGACCTGTAATGTTCTCAAGCTTCCAACCCGATGTCGCCTTGATCATGAAGAAACTTCAAATTGCATACCCAGTTTACTTCTTGACAAACGGAGGAACCGAGATATTTGACGATGTTCGAATGAATTCATTAGAAGACGCCAAGAAGCTCGCCATTGCTGGTGGACTGGATGGAATTGTTACGGATGTAGTTGGTATTTTCAAAAACCCTACGGTCGTAAGAGAGATCAAAGAATCAAATCTTTCCCTCTTGACTTACGGCAGATTGAATAACATCCCTGAAGCCGTGCAAGTTCAATACCTAATGGGCGTAGAGGGCGTAATTGTCGATTTAGTTCAAGAAATCACGACTTCGGTTGCAAATATAAAGACGACAAAAGCATACAGCGACAGCGAGAAGAAAAAGATGCTAATTGAAGAACAAGAAGTTGGATTAGAGGTGAAGGAGATCACCGAAAAGATCGAATTGGCGTTTCTATTGAACTTGATTTCAAAAGTGCTTCAACATTGA 1155 42.42 MAVKTAVQFSDVPLLDQVNDNVASLSLYATRLPTAALEVNIGRKSVPKFMVVGHRGHGMNVSTDKRLNVFKENSIISFNNAANYPLDFIEFDVQVTKDDIPIIFHDNFIFTKENGVVVEKRVTDLTLNEFFSYGPQRVAGVVGKTLFRESNGQIVGWNVETDDHHCTLQEAFEKVNPGLGFNIELKFDDYIVYEQEYLIHTLQVIMKVVYEYAKGRPVMFSSFQPDVALIMKKLQIAYPVYFLTNGGTEIFDDVRMNSLEDAKKLAIAGGLDGIVTDVVGIFKNPTVVREIKESNLSLLTYGRLNNIPEAVQVQYLMGVEGVIVDLVQEITTSVANIKTTKAYSDSEKKKMLIEEQEVGLEVKEITEKIELAFLLNLISKVLQH 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cich8g01710 384 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 43 339 IPR051578 GO:0046475(PANTHER)
Cich8g01710 384 FunFam Glycerophosphodiester phosphodiesterase GDPD2 41 336 - -
Cich8g01710 384 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 334 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cich8g01710 384 ProSiteProfiles GP-PDE domain profile. 49 334 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cich8g01710 384 Pfam Glycerophosphoryl diester phosphodiesterase family 54 327 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cich8g01710 384 SUPERFAMILY PLC-like phosphodiesterases 47 329 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cich8g01710 K18696 glycerophosphodiester phosphodiesterase [EC:3.1.4.46]
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Event-related genes

Select Gene_1 Gene_2 Event_name
63404 Cich6g01687 Cich8g01710
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cich Cich-Chr6:24488290 Cich8g01710 Cich-Chr8:57158265 wgd