Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich8g01710 | ATGGCGGTCAAGACGGCGGTGCAGTTCTCCGACGTGCCACTTCTCGATCAGGTCAACGACAACGTCGCCTCGTTGTCTCTTTACGCCACTCGGCTTCCCACCGCCGCATTGGAAGTGAACATTGGCCGGAAAAGTGTACCTAAATTCATGGTGGTCGGTCACAGAGGTCATGGCATGAACGTCTCGACGGATAAGAGATTGAATGTTTTTAAAGAAAATTCCATTATTTCATTCAATAATGCTGCCAATTATCCTCTCGATTTCATCGAATTCGACGTTCAGGTGACAAAAGACGACATACCAATCATTTTCCACGACAATTTCATCTTCACCAAAGAGAATGGTGTCGTAGTTGAAAAAAGGGTTACCGATTTGACACTTAACGAATTCTTCAGCTATGGTCCTCAAAGAGTAGCTGGTGTTGTCGGTAAAACTTTGTTTCGTGAATCAAACGGACAGATAGTCGGGTGGAACGTTGAGACCGATGATCATCATTGCACTTTACAAGAAGCTTTCGAAAAAGTAAACCCTGGTTTGGGATTCAACATCGAGTTGAAGTTCGATGATTACATTGTTTACGAACAAGAGTATCTCATCCATACTCTTCAAGTCATCATGAAGGTGGTATACGAATACGCCAAAGGAAGACCTGTAATGTTCTCAAGCTTCCAACCCGATGTCGCCTTGATCATGAAGAAACTTCAAATTGCATACCCAGTTTACTTCTTGACAAACGGAGGAACCGAGATATTTGACGATGTTCGAATGAATTCATTAGAAGACGCCAAGAAGCTCGCCATTGCTGGTGGACTGGATGGAATTGTTACGGATGTAGTTGGTATTTTCAAAAACCCTACGGTCGTAAGAGAGATCAAAGAATCAAATCTTTCCCTCTTGACTTACGGCAGATTGAATAACATCCCTGAAGCCGTGCAAGTTCAATACCTAATGGGCGTAGAGGGCGTAATTGTCGATTTAGTTCAAGAAATCACGACTTCGGTTGCAAATATAAAGACGACAAAAGCATACAGCGACAGCGAGAAGAAAAAGATGCTAATTGAAGAACAAGAAGTTGGATTAGAGGTGAAGGAGATCACCGAAAAGATCGAATTGGCGTTTCTATTGAACTTGATTTCAAAAGTGCTTCAACATTGA | 1155 | 42.42 | MAVKTAVQFSDVPLLDQVNDNVASLSLYATRLPTAALEVNIGRKSVPKFMVVGHRGHGMNVSTDKRLNVFKENSIISFNNAANYPLDFIEFDVQVTKDDIPIIFHDNFIFTKENGVVVEKRVTDLTLNEFFSYGPQRVAGVVGKTLFRESNGQIVGWNVETDDHHCTLQEAFEKVNPGLGFNIELKFDDYIVYEQEYLIHTLQVIMKVVYEYAKGRPVMFSSFQPDVALIMKKLQIAYPVYFLTNGGTEIFDDVRMNSLEDAKKLAIAGGLDGIVTDVVGIFKNPTVVREIKESNLSLLTYGRLNNIPEAVQVQYLMGVEGVIVDLVQEITTSVANIKTTKAYSDSEKKKMLIEEQEVGLEVKEITEKIELAFLLNLISKVLQH | 384 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich8g01710 | 384 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 43 | 339 | IPR051578 | GO:0046475(PANTHER) | |
| Cich8g01710 | 384 | FunFam | Glycerophosphodiester phosphodiesterase GDPD2 | 41 | 336 | - | - | |
| Cich8g01710 | 384 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 42 | 334 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cich8g01710 | 384 | ProSiteProfiles | GP-PDE domain profile. | 49 | 334 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cich8g01710 | 384 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 54 | 327 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cich8g01710 | 384 | SUPERFAMILY | PLC-like phosphodiesterases | 47 | 329 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich8g01710 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63404 | Cich6g01687 | Cich8g01710 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr6:24488290 | Cich8g01710 | Cich-Chr8:57158265 | wgd |