Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cich8g01712 | ATGAAGTCGTCACTGGGGAAGCTCGGGCGGAAATTATCGTTACAGAAGAGCGATGTGAGGGAGATGAGGGATCATCAGCCTTCCGCCCATATAGATGAGCTTGCTCAGGCTTCCAAGGATATGCAAGATATGAGAAACTGCTATGATGGTTTATTATCTGCAGCAGCTGCAACAGCAAATAGTATATACGAATTTTCGGAGTCACTAAATGAAATGGGAAGCTGTTTACTGGGGACAACCGGTGCAGATCCTGATGGTGAAAGTGGAAAAATGCTATCGACTTTAGGTGATATGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGATCTGATGTGGTTGTGACAATTACAAATCCATCAGAGTCTCTCCTTAGTGAGTTAAGGAAAGTGGAGGAGATGAAACTTCAATGTGATGAAAAAAGGGAGGTTTACGAATACATGATGGCACAACATAAGGAAAAAGGGAAATTGAGAAATGGAAAAGTTGAACAAAAACTAAAAGAAGCTCAAGAGGAATTCGATGAAGTTACAAGGCTTTGTGTTTTTAGAGTGAAATCACTTAAAGAAGGACAATGTCGTAGTCTTTTAACACAAGCTGCTCGCCATCATGCTGCACAGTTGAATTTCTTTCGGAAGGGATTGAAAGTTCTAGAAGCAGTAGAACCTTCCATAAGAAACGTTGCGGAAAAACATCGAATCGATTACCAAATCACAGGAGGTGAACCGATGAGTGGCTATGAAAGCACCGATGATGGAGAATTAAGTTTTGATTATAATAAACAAAAAAAACACGTGTTTGATGATGATGATGGAAGTTCACCAAATCCAATGGAGCTGGACCAAGTCGATGTTCCGTATTTAGAAGATTCAGAGATGAATCGGAACAAACAAAAAGGGGAGCAGATTTACGCAAGGCAACCAAGAGGAAGCAGCTATTCCGCCCCGCTATTCCCGGAAAAAATCGACAAATCCGATAAACAAAAAGGAACACAACCACCGCGTAAATTTTACTCTTATGTCCTCCCGCCTCCCATTATCGACACCCGGAATCCAATTTCAAAACCCTCCATTTCTCATTCCATTCCATTCCAACCAATTCCACTCGACACCGATTCCACTCCCGCCACCCAACTCCCCGCCCCATCCACCGCAAGATTCTCTGCCTCACAACAAGACAATCCTATTCCGGTCCACTACCCCGAGGGCAAAATAGTCAAACGACAATCCTATTCCGGTCCACTACCACCAAGCAAACAATCCTCTTTCAAAATCGCGTCCGCTAGTGGCCCGATTACCTCCGAGCTTCCGCAACCGCCATCGCGGATTCCGGTGTCGCAACCGTCGCGTAGCGCTTCACCGCCACCGATATCTTCGCCGAAAATAAGCGAGCTTCACGAGCTTCCGAGACCGCCTTCTAATTTACCGTTTTCAAAGTCCGTTGCTATTTCCGGTAATACGAATACGAATCGACATTCCGCTCCGTTGTATTCCAAGAATCAAGAAATCTCGCCGCCAAATAAACGCGCGATGCTAACGTCGATTTCCGCGTCTCCGCTTCCGCTTCCGCCCTCGGTTGTTCCTCGAAGCTTTTCCATACCCTCGAAGGGAAATGACGTTAATACCCTCGGGTAG | 1635 | 45.14 | MKSSLGKLGRKLSLQKSDVREMRDHQPSAHIDELAQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGSCLLGTTGADPDGESGKMLSTLGDMQLELQKIADTYRSDVVVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMAQHKEKGKLRNGKVEQKLKEAQEEFDEVTRLCVFRVKSLKEGQCRSLLTQAARHHAAQLNFFRKGLKVLEAVEPSIRNVAEKHRIDYQITGGEPMSGYESTDDGELSFDYNKQKKHVFDDDDGSSPNPMELDQVDVPYLEDSEMNRNKQKGEQIYARQPRGSSYSAPLFPEKIDKSDKQKGTQPPRKFYSYVLPPPIIDTRNPISKPSISHSIPFQPIPLDTDSTPATQLPAPSTARFSASQQDNPIPVHYPEGKIVKRQSYSGPLPPSKQSSFKIASASGPITSELPQPPSRIPVSQPSRSASPPPISSPKISELHELPRPPSNLPFSKSVAISGNTNTNRHSAPLYSKNQEISPPNKRAMLTSISASPLPLPPSVVPRSFSIPSKGNDVNTLG | 544 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 13 | 28 | - | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 477 | 520 | - | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 352 | 395 | - | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 430 | 544 | - | - | |
| Cich8g01712 | 544 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 359 | IPR037488 | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 293 | 399 | - | - | |
| Cich8g01712 | 544 | SUPERFAMILY | BAR-IMD domain-like | 32 | 226 | IPR027267 | - | |
| Cich8g01712 | 544 | CDD | BAR | 40 | 224 | - | - | |
| Cich8g01712 | 544 | Coils | Coil | 153 | 180 | - | - | |
| Cich8g01712 | 544 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 26 | 235 | IPR027267 | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 437 | 455 | - | - | |
| Cich8g01712 | 544 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cich8g01712 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 63403 | Cich6g01684 | Cich8g01712 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cich | Cich-Chr3:186379 | Cich8g01712 | Cich-Chr8:57187152 | dispersed | |
| Cich | Cich-Chr6:24478603 | Cich8g01712 | Cich-Chr8:57187152 | dispersed | |
| Cich | Cich-Chr8:8108385 | Cich8g01712 | Cich-Chr8:57187152 | dispersed | |
| Cich | Cich-Chr6:24469898 | Cich8g01712 | Cich-Chr8:57187152 | wgd |