AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien3g02856 ATGTGGTGTGCCACCCACACCCTGCATCCTGACCCTGGCCTTGGAGCCTTGCGGCCTTCACGGGAAAGTGTTCTCGATGAAAGTCGTTCGGCTCACATAATTTCTTGTTCATCTCCAAAAGAATCTTGGTACGTCATCATTAATATTCATGAAAGTGACAATGATAATTTCCTGCATTTGTGCTACTTTATTTTGTTTTTTTGTTTACAGAATTACGTTTACGTCACTGATTGGTTGATACAATGCCTTTTAATTTTAAATATCTACTGGGTTGTCGTATTGTTAAGTACTACAGATTCTTTGGAGATTCTTTGGAGATTGTCGATTTGTTTTGAATTGAATTCCCAACTTTTTTGTAAATTGAGCTCCTCGCAAATGGATTTTCTCGAGCTTCGTTTCTTGACCACATTGGGAGTCGCTTCGAATTTGAAGATGTACATAGTCGATAGCAGAGGAGGAGCGATAGCATGTATGCTGCTCGCACTTCTATTTCTCGGAACATGGCCGGCGATTTTAACTCTGTTAGAAAGACGTGGCCGACTTCCTCAACACACGTATCTTGATTACACGATCACCAATCTTCTAGCTGCTGTCTTAATCGCTTTCACATTTGGCGAATTTGGGCATAGCGACGATGATAAACCCAATTTCCTAGTCCAGCTTTCTCAGAATAATTGGCCTAGTGTCCTGTTTGCAATGGTGGGTGGGGTGGTTTTGAGCCTTGGAAATCTTTCAACACAATACGCTTGGGCGTTTGTTGGTTTATCGGTAACTGAGGTTATGACTGCAAGTATTACCGTTGTTATAGGTACAACTTTGAACTACTTTTTAGACGACAAAATCAACAAAGCGGAGATACTTTTTCCAGGGGTTGGTTGTTTTTTGATTGCTGTTTGTCTTGGTTCGTTGGTTCATGCATCAAATGCGAAAGATAATCAAACAAAGCTTGATGGATTAAAAGGTTCTAAAAATGGCGAAAAAGGAACAATTGGTAATGGGTCAAACACGAATTCAAGTAAAGATTTGGAGTATGGAACCGGTAAAGGAGAGAAAGCAAAAGCAGGGACTGCGAATTTTCTTATTGAACTCGAGAGCCAAAGAGCAATCAAGGTATTTGGAAAAAGCACATTTATCGGTTTGGCGATATGTTTATTTGCGGGAAGTTGTTTCTCTCTCTTCTCGCCAGCATTTAACCTTGCAACCAACGACCAATGGAATACACTAGACAACGGTGTACCTCACTTAAGTGTGTACACAGCCTTTTTCTATTTTTCTTGCTCGTGTTTTGTGATCGCGATAATTTTAAACATTACATTTCTTTACCGCCCGGCATTCAACTTGCCTAAATCTTCAATCAAAGCATATTTAAATGACTGGGAAGGCCGAGGTTGGGCCTTTCTGGCGGGTTTTTTGTGTGGTTTTGGAAACGGCCTCCAATTTATGGGAGGCCAAGCTGCCGGTTATGCTGCGGCTGACGCAGTTCAGGCGCTTCCACTTGTGAGTACCTTTTGGGGCGTGATCTTTTTTGGTGAATACAGAAAGTCATCTAAGAGAACGTATGTATATCTTATAAGCATGTTGTCGATGTTTATTGTGGCTGTTGCAGTTCTAATGGCGTCATCTGGTCACCGAAAACATTGA 1641 41.32 MWCATHTLHPDPGLGALRPSRESVLDESRSAHIISCSSPKESWYVIINIHESDNDNFLHLCYFILFFCLQNYVYVTDWLIQCLLILNIYWVVVLLSTTDSLEILWRLSICFELNSQLFCKLSSSQMDFLELRFLTTLGVASNLKMYIVDSRGGAIACMLLALLFLGTWPAILTLLERRGRLPQHTYLDYTITNLLAAVLIAFTFGEFGHSDDDKPNFLVQLSQNNWPSVLFAMVGGVVLSLGNLSTQYAWAFVGLSVTEVMTASITVVIGTTLNYFLDDKINKAEILFPGVGCFLIAVCLGSLVHASNAKDNQTKLDGLKGSKNGEKGTIGNGSNTNSSKDLEYGTGKGEKAKAGTANFLIELESQRAIKVFGKSTFIGLAICLFAGSCFSLFSPAFNLATNDQWNTLDNGVPHLSVYTAFFYFSCSCFVIAIILNITFLYRPAFNLPKSSIKAYLNDWEGRGWAFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVIFFGEYRKSSKRTYVYLISMLSMFIVAVAVLMASSGHRKH 546
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien3g02856 546 Pfam Ureide permease 185 540 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Cien3g02856 546 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 145 545 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0022857(InterPro)|GO:0071705(InterPro)
Cien3g02856 546 MobiDBLite consensus disorder prediction 327 343 - -
Cien3g02856 546 MobiDBLite consensus disorder prediction 315 347 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien3g02856 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr3:75914683 Cien3g03032 Cien-Chr3:81281065 dispersed
Cien Cien-Chr3:75914683 Cien3g02857 Cien-Chr3:75929723 tandem