AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien3g02858 ATGGAGTGGGACTTCTTCGAACAAACTCTCATTGACGGCCATTATATCTCCGTCTTCTTCTCCTTCGTATTTCGCCTTGAAAAGACATGGCAATCGATTCAACCTTTTCTCCCGAAGGTTCCTCGAGGAATTTGGTCCCGAGGTTGTCATTCAAGTCAACTGTTGTCGTTAGAAGAGAATCAGGATCCCCTCGAACGATTGATAAGAGAGTCAAAATCTGCCGAAGAAGTCGATCGTTCGGCGGCCATGGAAGAAGAAATCGACAAGGTGAAGTCTCAAATGGTAGTTGAAGAATGGAGTGGGACTTCTTCGAACAAACTCTCGTTGACGGCCGTTATATCGCCGTCTTCTTCTCCTTCGTCTTTCGCCTTGAAAAGACATGGCAATCGATTCAACCTTTTCTCCCGAAGGTTCCTCGAGGCATTTGTTCCTGAGGGGTTTCCAAGTAGTGTGACTCCAGATTACACCCCTTTTCAGACATGGGATTTATTGCAGGGCCTTTCAACATACATAAGGACCATGCTCTCTACACAAGCTCTTTTAAGTGCTATAGGAGTTGGGGAGAAATCAGCAACTGTAATTGGGGCTACTTTTCAGTGGTTTTTGAGGGATTTAACTGGAATGCTTGGAGGTGTCATGTTCACATTCTACCAGGGCTCAAATCTAGACAGCAATGCCAAAATGTGGCGTCTGGTTGCTGATCTTATGAATGATCTTGGAATGCTGATGGATCTTTTATCTCCATTGTTCCCTTCCGCCTTTCTATTCATTGTCTGCATAGGAAGCTTATCAAGATCTTTCACTGGTGTTGCCAGTGGAGCAACTAGAGCTGCTTTGACCCAACATTTTGCCCTTCAGAATAATGCTGCAGATATATCTGCAAAGGAAGGAAGTCAGGAAACAGTGGCAACAATGATTGGAATGGCATTAGGAATGCTTCTTGCACAAATTACAATTGGACACTCATTTATCATATGGTTCTCTTTTTTGTCCCTCACAATCTTCCACATGTATGCTAACTATAAAGCTGTTAGATGCCTTAATTTAACTACATTAAACTGTGAAAGAAGTTCAATTCTTTTGCAGCATTTCATGGACACCAGTGAAGTTCTCTCTCCAAAAGAGGTATCTGTTTTAGAGCATGTATTACCATTATGGATCAGTTCTTGGAGTTCAAAAAGTAAAAAATGTTTGTATACACGCGTACGCTTAGGTGTCAGGGTTTCCTCATTTGACACCCTGGAAATGAAGGAGCTATTAAGTTATGCTGGATCTCAATACGAGAAAGGAAAATACTTGCTACTTGAGAAAAAAGGAATTGTGAGCATTGTTATGCATAAAGATTCAAAAACTGGAGATGTGATGCAGGGGTTTATTCATGCTCTTGTTATGGTGAATATTTTAGATCTAAACCCTAAATCATCATTACATATGGACAGCCAAACATGGATGAATAAACACTATCAAGACTTTATTTTTAAGCTTCAATCGGGTGGTTGGAAAACAGAGCGCCTTTTATCATCATCAATCATTTGGAGGGCAAACTGGACAAATGAGTCTCCAATTAAAAAGATAAACTAA 1581 40.86 MEWDFFEQTLIDGHYISVFFSFVFRLEKTWQSIQPFLPKVPRGIWSRGCHSSQLLSLEENQDPLERLIRESKSAEEVDRSAAMEEEIDKVKSQMVVEEWSGTSSNKLSLTAVISPSSSPSSFALKRHGNRFNLFSRRFLEAFVPEGFPSSVTPDYTPFQTWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVMFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFLFIVCIGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMIGMALGMLLAQITIGHSFIIWFSFLSLTIFHMYANYKAVRCLNLTTLNCERSSILLQHFMDTSEVLSPKEVSVLEHVLPLWISSWSSKSKKCLYTRVRLGVRVSSFDTLEMKELLSYAGSQYEKGKYLLLEKKGIVSIVMHKDSKTGDVMQGFIHALVMVNILDLNPKSSLHMDSQTWMNKHYQDFIFKLQSGGWKTERLLSSSIIWRANWTNESPIKKIN 526
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien3g02858 526 PANTHER RUS1 FAMILY PROTEIN C16ORF58 81 516 IPR006968 -
Cien3g02858 526 Pfam Vitamin B6 photo-protection and homoeostasis 134 367 IPR054549 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien3g02858 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1706269 Cien Cien3g02858 Cien-Chr3:75943110 Cien3g00841 Cien-Chr3:16715954