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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03024 ATGGTGAAAATAGGACTGGACTGGATGGAGAAAGAAACAGCAAACTACTCAAAATCACACACAAATTTTACACCGGCAACGATGATGATAAGATCAGTACCTTGTCAATCTCCTGTTTACTCTACGCGGTTAGCTCCGTCGACGACGATCTGTTGTTCTTCCAGAAATAATGCATATATACCTAAACTCGAGCCTTTTAGCCGAAGCAAGCTTGAGAGAATCGTTAAAGATCCTCCGTTGATCCAGAAATCGGAAAACGATCTTGCAGATTACTGTTCGACGCTTGAAGGAGACCCGTCTTACAGCTGCTGGAGAGCCTATTTCGAGCTCAAAGACCTCGAAAAAGAAGCACCGAAGGAGGTAGTGGAGAGGGTGATACTGGAATCAGGCGGTGTGAAATCGTTAGTTGGATGCTTACACGGGATTTCCGAAATTCACAAATCGAAAAAGCAATCAGAACATCCGAACGAATCAAACATGAACAGTTCAAACTCGAATACAGTAGCAGCTAAAGCTGAAAGGACATGTCCAGTTCCAGACGGATTACCGAAGAGTCGGGAAGAGATGGAAGAAGAGGAGAAAGGGAAAATGCCCGATTCGCCCTTCACCAGATTGCTTCGCTCGAAAGGAACCTTCCCTGCCTGGTACTCCCCTGCTCCTGATCACGAAACAGATTGA 678 45.58 MVKIGLDWMEKETANYSKSHTNFTPATMMIRSVPCQSPVYSTRLAPSTTICCSSRNNAYIPKLEPFSRSKLERIVKDPPLIQKSENDLADYCSTLEGDPSYSCWRAYFELKDLEKEAPKEVVERVILESGGVKSLVGCLHGISEIHKSKKQSEHPNESNMNSSNSNTVAAKAERTCPVPDGLPKSREEMEEEEKGKMPDSPFTRLLRSKGTFPAWYSPAPDHETD 225
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03024 225 PANTHER CCG-BINDING PROTEIN 1 41 225 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(PANTHER)|GO:0036033(InterPro)
Cien5g03024 225 MobiDBLite consensus disorder prediction 180 200 - -
Cien5g03024 225 MobiDBLite consensus disorder prediction 155 171 - -
Cien5g03024 225 MobiDBLite consensus disorder prediction 147 205 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03024 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
64424 Cien1g03070 Cien5g03024
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:82371546 Cien5g03024 Cien-Chr5:72408098 wgd