Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03034 | ATGGATGACGTACCAGGATCCATGGGGACAAGTGCTGGTTTTGCCTTGAGACTTGGACAAACCATTTTTTCATCTGCTTCTCTTCTCTTCATGGCGTATGGTGTTCAGTTTTACAGCTATTCATCTTTCTGTTTCTTGGTGACAATCATGGGTTTGGTTATTCCATGGAGTTTCACATTGGCACTGCTTGATGGATACTCGGTTCTTGTAACATGCCCAGTTCGGCAAAAGGGTATACTGGTGATTATCGTTATTGGAGATTGGATGTTGTCGACTTTAACACTTGGTGCGGCTTCTTCAGGTGCTAGTGTGGTGGATATCTTGATGAGGGCAGATGGGTCTTTTTGCCCTTCGAATATATGTAGTCGATATCTTCTGTCGACCGTATTTGCTTTCTTGTCGTGGTTCTTATCCATGGGTTCTTCCTTGTTCAATCTATGGCTTCTTCCATCTTTGTGA | 459 | 43.36 | MDDVPGSMGTSAGFALRLGQTIFSSASLLFMAYGVQFYSYSSFCFLVTIMGLVIPWSFTLALLDGYSVLVTCPVRQKGILVIIVIGDWMLSTLTLGAASSGASVVDILMRADGSFCPSNICSRYLLSTVFAFLSWFLSMGSSLFNLWLLPSL | 152 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03034 | 152 | PANTHER | CASP-LIKE PROTEIN 5B3 | 1 | 151 | IPR045009 | GO:0016020(PANTHER) | |
| Cien5g03034 | 152 | Pfam | Casparian strip membrane protein domain | 8 | 137 | IPR006702 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03034 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr2:55450514 | Cien5g03034 | Cien-Chr5:72649161 | dispersed | |
| Cien | Cien-Chr5:72649161 | Cien7g02306 | Cien-Chr7:34549608 | dispersed | |
| Cien | Cien-Chr5:72649161 | Cien8g02956 | Cien-Chr8:56969238 | transposed |