AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03036 ATGTTATTCTTCTTTTACATATTCATCTTCTATAACAAGGTCCCCTTCTTTATATACGGATCACCTAACAAAATCTACAAAAAACCAACAACCATGAAATACACTGAACTTTCCCATTTCAGCCACCCTCAACACCGGCTCAAACCGGGCTACACCGAGGTCCCATTCAAGTGTGATGGATGCAAGGAAGTTGGCATAGGTTCCAACTACAAATGCACAACATGCAACTACGATTTGCACGTCCATTGTGCCCTTCCTTCCCCTTCCATCACCCATCCTTTCTACACCAAGTGCTCGTTCCAGTTCTTGACCCGCCCACCGGGGTCTATAGCCAGATACTGCAACGCATGCGAGAAAGCAGTGACAGGATTCGTTTACCATTGCAAGTTGTGCGGGTTCGACCTTCACCCATGTTGCGCCAAGCTTCCAACTATGTTGGATGATGGACAGGTGGAACTGTACCTGTATAGAAAGGTAGGGTCCGCCTGCCACAGATGTGGCAGGAAAGGGCGCAGTTGGAGTTATAGGTCCACGTGCAAGAAGTACAATTTGCACGTGGCTTGTGTAAAGGAGATGTTGGTGGAGAGTTGGCATGAGATATATTTTGGTAGGAGTGGGTTGAAGGGTGATCTTAGTGGTGATTTGTTTGGGCAAAGTGGGAAATCTGAGACAAGAATTCCAAGTTTGAAAGGTACATTGGAAAGCTATCATCAGAATCATCAAAGCAAAGGGAAAGTGAAGAAGTGTTGTGAAATGGCTGGCTTGGCTATGCAGTTCGTGATATCAGCCGTTCTTGGTGATCCCACCACTCTAATTGCAGGTGTTGTTGGTTCTTTAATGTCCAAATAA 849 45.7 MLFFFYIFIFYNKVPFFIYGSPNKIYKKPTTMKYTELSHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSPSITHPFYTKCSFQFLTRPPGSIARYCNACEKAVTGFVYHCKLCGFDLHPCCAKLPTMLDDGQVELYLYRKVGSACHRCGRKGRSWSYRSTCKKYNLHVACVKEMLVESWHEIYFGRSGLKGDLSGDLFGQSGKSETRIPSLKGTLESYHQNHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGSLMSK 282
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03036 282 SUPERFAMILY Cysteine-rich domain 66 145 IPR046349 -
Cien5g03036 282 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 31 280 - -
Cien5g03036 282 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 44 98 IPR002219 -
Cien5g03036 282 Pfam C1 domain 103 140 IPR004146 -
Cien5g03036 282 Pfam C1 domain 40 84 IPR004146 -
Cien5g03036 282 Gene3D - 43 89 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03036 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
64422 Cien1g03062 Cien5g03036
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:82262992 Cien5g03036 Cien-Chr5:72658557 wgd