AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03039 ATGGATGAAACGGAGAACCCGTCGGAAGCCAAGAGAACCACCGTCGGGCCGCCATCCGTGCTGGAGTACCTGGACCCCAACTACTGGAACGACAGGTTCACTTCCGAGGATCATTACGAATGGCTTAAAGATTACTCCCATTTTCGTCATCTCATTCAGCAACATATCAAACCTTCATCTTTTGTATTGGAGCTAGGGTGTGGAAACTCACAACTGTCTGACGAGTTATATAAAGAAGGAATCACCAGGCTAACCTGCATCGATTTATCTTCAGTTGCAGTCGAGAAGAAGAAGAAACAGTTGTCATCAAAAGGCTACAAAGATATTAAAGTGTTGGAAGGAGACATGTTGAATCTTTCATTTCCTGATGAGTCGTTCGATGTTGTTATAGAGAAAGGAACAATGGATGTTTTGTTCGTGGACAGTGGCGACCCATGGAACCCAAAGCCTGAGACCGTAAACAAAGCAATGTCAATGCTTCAAGGTGTTCATAGAGTTTTGAAACCGGATGGGATTTTTATTTCAATCGCTTTTGGTCAGCCACATTTCAGACGGCCGTTATTCAATGCTCCTGAGTTTACATGGTCAGTTGAGTACACTACATTTGGGGATGGATTTCACTATTTCTTTTATATCTTGAGGAAGGGATGTAGATTGTTGGAGATGAATGAAGTGAAGAAGGTTGATGCACCTTGTCTTGACCTTTTTCAAGATGAATTGGATAATGAAGATTACTTGTTTCGGACCAATATTGATGACGTGGATGATGATAGTTGA 777 42.08 MDETENPSEAKRTTVGPPSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPSSFVLELGCGNSQLSDELYKEGITRLTCIDLSSVAVEKKKKQLSSKGYKDIKVLEGDMLNLSFPDESFDVVIEKGTMDVLFVDSGDPWNPKPETVNKAMSMLQGVHRVLKPDGIFISIAFGQPHFRRPLFNAPEFTWSVEYTTFGDGFHYFFYILRKGCRLLEMNEVKKVDAPCLDLFQDELDNEDYLFRTNIDDVDDDS 258
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03039 258 Pfam Methyltransferase domain 61 177 IPR025714 -
Cien5g03039 258 CDD AdoMet-MTases 62 178 - -
Cien5g03039 258 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 248 IPR029063 -
Cien5g03039 258 Gene3D Vaccinia Virus protein VP39 21 229 IPR029063 -
Cien5g03039 258 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 15 216 IPR051419 -
Cien5g03039 258 FunFam EEF1A lysine methyltransferase 4 21 231 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03039 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr4:51126012 Cien5g03039 Cien-Chr5:72729593 dispersed