AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03075 ATGAATTCTATTGATCTCAAATTGGAAAAGGCCAACGCGATCTTTCGATACCGCAGGCTTCACAGTCTCACGACTCTGTTTCGATGCATGGAGATGTTATTCTTTTTCATTCTAATTTCTAGGTTTTCCTCTCAACTACCGTTCGCCATTAGAGTCTCTACTGACCATTTCAGAGGAATTTCCGTTGCGATTTTTAACCCTAGGTTTGTTTTTGTGATTGGAAACGTAATTATCTTAATACTGTTATTCAAATCTCGAGTTATTGAAATTGGAGATTGCAATGAAAAACTCGATGTTTACGACGAGTTTGTTAAGAAATGTGAGAAGAGCAGAGTAAATACTAGCAGTCTCTCAACCATTGCTACTACTGAAATCGTTCCGAGTAAAAAAAGGAAGATTTGCAGGAGTCAATCCGAGAATCTAATGATCGTGAATTGTAAGGACAATCAAACTCACCAGAAACTAAGGCGGTCGGTGACGACGAGAAACATATCGAAGAAGATTGATCGTGGTGACGGTGAGGCTGTACAGGAGAAACGTTGCACGGCGGATGAACTGAGCGGAGAAGAGTTCCGGCGAATAGTGGAGGCGTTTATTGCGAGGCAACAACAATCCCTACGAGATGAAGAGCTGACTCAGGTAGCATATGTAGCTGTATAA 660 41.36 MNSIDLKLEKANAIFRYRRLHSLTTLFRCMEMLFFFILISRFSSQLPFAIRVSTDHFRGISVAIFNPRFVFVIGNVIILILLFKSRVIEIGDCNEKLDVYDEFVKKCEKSRVNTSSLSTIATTEIVPSKKRKICRSQSENLMIVNCKDNQTHQKLRRSVTTRNISKKIDRGDGEAVQEKRCTADELSGEEFRRIVEAFIARQQQSLRDEELTQVAYVAV 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03075 219 PANTHER TRANSMEMBRANE PROTEIN 5 213 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03075 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
66513 Cien5g03075 Cien9g02444
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:73577917 Cien8g02451 Cien-Chr8:48521780 dispersed
Cien Cien-Chr5:73577917 Cien9g02444 Cien-Chr9:49721187 wgd