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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03078 ATGGCTTGTTCTAGTGGTACAACAACGACGTCGTCTGGTGGTTCAGATCTTCAAGGAGAAATTGATCAGAGGAAAAAGAGAAGAATGCTTTCGAACAGAGAATCAGCAAGAAGATCGAGGATGAGGAAGCAAAAGCACCTGGACGATTTGATGACTCAGCTGAGTCAACTCAGGAAGGAGAGTACCCAGATCATGTCTAGTATCAGTATGACCACACAGCATTTTATGAGTGTGGAGGCTGAGAACTCGGTGCTGAGGGCACAGGTGGCGGAGCTCAGCCACCGGCTGGACTCTCTGAATGATATCATTGCCGCCATGAAACAACCTATTCACGCCGGAAGTGGGTTTGTCGAGGAACAGTATGATGGAGGTTACAATGAGTTCGGGGACGAGTTTACCAACAACTCACTGAGTTATCTTTTCGCTTGCCAACCTATCATGGCTTCTGCTGACATGATTCTGTACTGA 468 47.44 MACSSGTTTTSSGGSDLQGEIDQRKKRRMLSNRESARRSRMRKQKHLDDLMTQLSQLRKESTQIMSSISMTTQHFMSVEAENSVLRAQVAELSHRLDSLNDIIAAMKQPIHAGSGFVEEQYDGGYNEFGDEFTNNSLSYLFACQPIMASADMILY 155
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03078 155 Pfam bZIP transcription factor 24 75 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 MobiDBLite consensus disorder prediction 19 45 - -
Cien5g03078 155 Gene3D - 22 75 - -
Cien5g03078 155 CDD bZIP-plant-GBF1 25 76 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 SMART brlzneu 20 84 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 FunFam BZIP transcription factor 22 73 - -
Cien5g03078 155 Coils Coil 40 60 - -
Cien5g03078 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 SUPERFAMILY Leucine zipper domain 24 76 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cien5g03078 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 150 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Cien5g03078 155 MobiDBLite consensus disorder prediction 1 45 - -
Cien5g03078 155 MobiDBLite consensus disorder prediction 1 18 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03078 K25786 bZIP transcription factor 1/2/11/44/53
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Event-related genes

Select Gene_1 Gene_2 Event_name
64407 Cien1g03037 Cien5g03078
66516 Cien5g03078 Cien9g02439
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr2:90286662 Cien5g03078 Cien-Chr5:73621885 dispersed
Cien Cien-Chr4:71566426 Cien5g03078 Cien-Chr5:73621885 dispersed
Cien Cien-Chr5:73621885 Cien6g00386 Cien-Chr6:6927172 dispersed
Cien Cien-Chr6:23488452 Cien5g03078 Cien-Chr5:73621885 transposed
Cien Cien-Chr1:81752806 Cien5g03078 Cien-Chr5:73621885 wgd
Cien Cien-Chr5:73621885 Cien9g02439 Cien-Chr9:49666902 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cien9g00039 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.878 1.57e-108 321.0
Cien9g00495 . 114 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 24.528 8.23e-14 67.4
Cien9g02306 . 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.293 5.89e-18 80.5
Cien9g02439 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.057 2.86e-42 137.0
Cien9g02483 ACH 165 454 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34000 37.586 6.18e-41 142.0
Cien8g00373 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 64.655 1.07e-42 140.0
Cien8g00526 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 39.744 1.45e-24 93.2
Cien8g00648 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 46.0 5.07e-95 286.0
Cien8g02357 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.102 1.17e-35 127.0
Cien8g02517 ACH 1 312 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 49.856 9.41e-94 280.0
Cien8g02711 ACH 54 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 44.762 2.58e-19 78.2
Cien8g03034 ACH 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 69.828 2.31e-51 161.0
Cien7g00558 ACH 29 372 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 62.429 3.58e-136 393.0
Cien7g01134 . 12 67 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 62.5 2.53e-15 65.5
Cien7g01278 . 12 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 48.263 3.89e-125 373.0
Cien7g01337 . 1 254 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 58.039 1.31e-94 276.0
Cien7g01597 . 4 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 58.316 2.43e-157 451.0
Cien7g01839 . 31 111 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 49.383 1.26e-22 86.7
Cien7g01881 ACH 1 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 57.267 6.72e-110 321.0
Cien7g01970 ACH 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 43.125 6.36e-27 98.2
Cien7g02173 . 9 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.088 2.15e-42 138.0
Cien7g02175 ACH 40 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 57.246 7.33e-47 150.0
Cien7g02654 . 54 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 60.87 4.21e-40 132.0
Cien7g02658 . 12 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 50.323 4.18e-36 122.0
Cien6g00386 ACH 10 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.904 4.87e-42 136.0
Cien6g00550 . 142 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 29.834 7.30e-17 76.6
Cien6g01095 ACH 29 390 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 63.859 1.53e-151 432.0
Cien6g01189 . 62 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 54.054 5.92e-66 207.0
Cien6g01362 . 37 115 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 34.177 5.49e-06 40.8
Cien6g01792 ACH 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 78.906 1.19e-65 196.0
Cien5g00736 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.342 3.24e-64 203.0
Cien5g00947 ACH 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 54.662 1.26e-100 296.0
Cien5g00949 . 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 54.487 7.73e-97 286.0
Cien5g01095 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 56.738 2.27e-154 441.0
Cien5g01319 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 48.233 4.75e-111 332.0
Cien5g01902 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.556 3.33e-115 337.0
Cien5g02391 . 48 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G15830 42.056 3.31e-16 72.4
Cien5g02840 . 120 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 47.596 6.27e-43 146.0
Cien5g02995 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 47.877 2.33e-93 284.0
Cien5g03078 ACH 15 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.98 9.11e-42 135.0
Cien5g03288 . 1 304 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.563 6.60e-103 303.0
Cien5g03716 . 12 67 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 62.5 8.51e-16 65.9
Cien4g01074 . 121 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 29.258 2.93e-20 86.7
Cien4g01129 . 56 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 64.808 4.08e-116 342.0
Cien4g01995 . 37 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 43.182 3.23e-19 77.0
Cien4g02499 . 213 253 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 69.767 5.17e-10 51.6
Cien4g02836 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 54.878 6.09e-120 354.0
Cien4g02976 ACH 9 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.0 2.95e-46 147.0
Cien4g03320 . 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.067 4.82e-78 243.0
Cien3g00716 ACH 98 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 55.507 5.73e-66 204.0
Cien3g00966 . 12 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 59.848 2.13e-54 166.0
Cien3g01402 . 24 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 41.546 4.64e-73 229.0
Cien3g01791 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.829 2.95e-94 280.0
Cien3g03761 ACH 1 357 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.887 2.60e-108 318.0
Cien2g00104 . 63 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 34.222 1.14e-17 76.3
Cien2g00294 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 35.736 1.69e-36 138.0
Cien2g00379 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.831 3.07e-180 499.0
Cien2g01444 ACH 24 214 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 35.079 9.97e-28 102.0
Cien2g01759 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.385 3.66e-111 326.0
Cien2g02214 . 75 150 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 48.684 1.67e-15 68.6
Cien2g02586 . 188 254 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 59.701 5.09e-19 78.2
Cien2g04043 ACH 9 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.375 7.81e-43 138.0
Cien2g04241 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.208 4.73e-112 333.0
Cien1g00409 ACH 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 72.549 1.71e-58 177.0
Cien1g00946 . 11 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.563 0.0 578.0
Cien1g01470 . 142 268 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 45.312 1.40e-20 90.1
Cien1g01548 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.529 3.35e-178 494.0
Cien1g01613 . 121 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.957 3.05e-18 81.6
Cien1g02303 . 202 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 44.037 3.29e-15 67.0
Cien1g03037 ACH 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.41 4.14e-50 157.0
Cien1g03500 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 55.521 1.22e-98 291.0
Cien1g03573 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 65.476 5.26e-146 417.0
Cien1g03647 . 52 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 49.086 2.13e-169 501.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Cien bZIP_1 9.7e-09 CL0018 TF bZIP