Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03083 | ATGTCCCCAAACTTTTCAATATCCGAAGAAGGTTCACCTTCACCTTTCACTCACCGCGGGTGGGCCCACAGGCCCACCCGCGGATCCCACGGCGGGTCATCTGACGGATCCTCAGAACCCACCTACTCTGAGCTCATGTCATTTTACAACAATAGCAAAAGATGGTCTTTCGATAGCGAGTCTTTAAGTTTTAGTCGCGATAGGGTTAGCCGGTCTAGCGGTAGGGTCTCGTCTTCTCCCTCCATTGATGTCCAACCGTGCGGTGTTTGCTCCAAGCTTTTGACCGAAAGGTCACACTGGGGGGCCCACAAAATGGCGGCCAATGGGCTTCCGGTGGTGGCGGTTTTAATGTGCGGACATGTTTATCATGCGGAGTGTTTAGAGAATATGACACCGGAGGTTAACAAGTATGATCCCGCGTGTCCCGTGTGTACTTTCGGGGAAAAAAAGGTTTTAAAATTGTCGGAAAAAGCGCGAGGGGAAATGGATTTGAAGGGTAAATTTGGTAAATTGAGGAAACGAGTGATTGATGGTGATTCGGTTTTGTTCGATAGGGTGAAAAGTAGAGGGCCTAGAATGGGGGCAAGAGTGAGGTTTTTCGCTTTTAAAAAGGTAGGCGTATGA | 624 | 49.04 | MSPNFSISEEGSPSPFTHRGWAHRPTRGSHGGSSDGSSEPTYSELMSFYNNSKRWSFDSESLSFSRDRVSRSSGRVSSSPSIDVQPCGVCSKLLTERSHWGAHKMAANGLPVVAVLMCGHVYHAECLENMTPEVNKYDPACPVCTFGEKKVLKLSEKARGEMDLKGKFGKLRKRVIDGDSVLFDRVKSRGPRMGARVRFFAFKKVGV | 207 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03083 | 207 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 145 | IPR001841 | - | |
| Cien5g03083 | 207 | PANTHER | EXPRESSED PROTEIN | 26 | 150 | - | - | |
| Cien5g03083 | 207 | SUPERFAMILY | RING-U-box | 80 | 145 | - | - | |
| Cien5g03083 | 207 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 67 | 146 | IPR013083 | - | |
| Cien5g03083 | 207 | SMART | ring-2 | 87 | 144 | IPR001841 | - | |
| Cien5g03083 | 207 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03083 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr4:76458555 | Cien5g03083 | Cien-Chr5:73695632 | dispersed | |
| Cien | Cien-Chr5:73695632 | Cien9g01116 | Cien-Chr9:16461885 | dispersed |