AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03140 ATGGCGAATTCCGACGACGGGAAGGTATCGTACAATCTTGACTACCGATCGAAAGATGATGCGTGGTACACTTCCGGCGTCATTCTCGAAGACGGACAACGGCTGCGTGTGAAGCTCGAGGGTTTTGGGTCTAGCTATGACGAGGTTTTCTCCATCGCTAATTTCTCTACTCACCATGAAATCGAAGAATTTCTCCGTAGATTCCGTCCAGTATCCGTGCCGGTAGAGCTGGGAGAGTGCTCCAGCGTAATACAAGGAATGCTGATCTGTGCTAAGTATACAAACGATGGATCACTTCGATACTTTGACGCCATTGTTGATGCTGTGTATCACAAAGAGCATACGCCTGAAAAGTGTCTATGTAACTTTCTACTCTTCTGGCAACATGGTCCAGATGATGGAAACATAACAGCAGGAAGTATTGATGATATCTGCCATATTATGTCTGGTCCCCTTGATCACAGAGTAACTTACTTTGTTAAGCTTGTGAGAGAAAAACTTAGAGGGGCCTCTTCTCAATCTTCTGTCATATCCAAGACACCATTTCTGTCTAGAAAAATAAAAGAGGAATTCAGTGGTGATGGAGACAGTTGCTATGGTGGATTCTTTGAAGTTAAGGGAAGATTCAAAACTCCAATAATTGATCAAGATAAAGAAATGGGAGGTGTCAAAGAAACATGCTCACATCATTACATCATATTAGAGAATCTGGAGAAAGATCTTTCTCCAGTTTTAATGAAAGAGTTCATATATGAACAAACTTCAATCACACCACATGCTTATGTTTTTGAAAGCTTGTCATTTGATACATATGCAAGAGGAGTAATCATTGTTGATAGCAAAAAAAAGCTTAAAAGGATATTTGAATTCATAAGCAATCCAAATCACTTTATCATATCTTCATCTGGAAGGCCATGGGTAATAGCCGAAGACATGCTTAGAACTGGAAATGGAACTTTCAATTTAAACTTGCTGCCAAAATCTGAGAATAAAGACACAGGGAACAAGTTAATGGTGGTTAGATTGGGAACAGAAGAATATAAAAAAGCTAAAATATCAAAAGATTTATATATGGAATTCAGGAATCATGTAAATGGACTTGTGAAGAGGTTAGATATGGAGGAAAAGAAGAAATGGCGTACATTGAGTGCAAATTAG 1158 38.95 MANSDDGKVSYNLDYRSKDDAWYTSGVILEDGQRLRVKLEGFGSSYDEVFSIANFSTHHEIEEFLRRFRPVSVPVELGECSSVIQGMLICAKYTNDGSLRYFDAIVDAVYHKEHTPEKCLCNFLLFWQHGPDDGNITAGSIDDICHIMSGPLDHRVTYFVKLVREKLRGASSQSSVISKTPFLSRKIKEEFSGDGDSCYGGFFEVKGRFKTPIIDQDKEMGGVKETCSHHYIILENLEKDLSPVLMKEFIYEQTSITPHAYVFESLSFDTYARGVIIVDSKKKLKRIFEFISNPNHFIISSSGRPWVIAEDMLRTGNGTFNLNLLPKSENKDTGNKLMVVRLGTEEYKKAKISKDLYMEFRNHVNGLVKRLDMEEKKKWRTLSAN 385
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03140 385 Gene3D - 75 146 - -
Cien5g03140 385 PANTHER SAWADEE PROTEIN 7 377 - -
Cien5g03140 385 Pfam SAWADEE domain 11 145 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03140 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:75389718 Cien5g03140 Cien-Chr5:75411002 proximal