AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03154 ATGCATAAAACGGCGCAATCGTGGTTCACCGGAGGGCCGAGCCAGACGAACAGCGATCTGCTAAAGCAACCTCCCTCTCTTCTTGCTGATTGGAATGCCTACGCCTCATCTTCACAATCTAACCAAGATCTAGATTCTTCCAGCCTCGGATTCGATCTCGAAGCTGCAGTTAGGGATAAGGTTTCCGGCACTTTCAACGTAGTTTCAAAGGGAGTGAGGGACATACCTGGAAATTTACAATCTGCCACAAGCAATGTTCCATCCGGAAAATCATTTATGACATTTGGCATTCTTCTGGCTGTTGGAGTGTTTCTTGTCTTCATTGCAATCACCGTGTTTCTACCAGTCATGGTGCTTGTACCTCAGAAGTTTGCCATATGTTTCACTATCGGCTGTGCCCTCATAATCTGTTCCTTTTTTGCCCTCAAAGGATACAAAACTCAGTTTGCACATATGACATCTAAAGAGAGACTTCCTATTACATTGGGGTTTATTGGCAGCATGATGGGTACCATTTATGTTTCAATGGTGCTTCATAGTTATGTTCTTTCTGTGTTCTTCTCTATTTTACAGGTCATCTCATTGTCATACTATGCAATTTCCTACTTTCCTGGAGGATCAGCTGGTGTCAAATTCTTCACTTCTGCCATTACTTCTTCAATTCTAAGATGCTTTGGGAGGTGA 684 43.13 MHKTAQSWFTGGPSQTNSDLLKQPPSLLADWNAYASSSQSNQDLDSSSLGFDLEAAVRDKVSGTFNVVSKGVRDIPGNLQSATSNVPSGKSFMTFGILLAVGVFLVFIAITVFLPVMVLVPQKFAICFTIGCALIICSFFALKGYKTQFAHMTSKERLPITLGFIGSMMGTIYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03154 227 Pfam Got1-Sft2-like family 93 204 IPR007305 GO:0016192(InterPro)
Cien5g03154 227 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03154 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:64921430 Cien5g03154 Cien-Chr5:75771375 dispersed