Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03165 | ATGGCAGCGGTCGGAGCCTTGAAGCCACCTCATTGCTTCTCTTCCTCCGGCATTGTTGCCAATAGGAGTCACCTCCGTTCTTCGTCAACTTTTCGGAGCTTATCGTTTGCCTCGTCTCATCTGTCCGGCGAGAAGGTGACTTCAGTATCATCCGTTCGACAACGCCGTTGTGGAGGTAGAACTTCGGTGATTGTTTCGCCGAAAGCTGTTTCCGATTCCAAAAATTCGCAGACATGTCTTGATCCTGACGCTAGTCAAAGTGTATTGGGGATAATACTTGGAGGTGGAGCTGGTACACGTCTCTACCCTTTAACAAAGAAGAGAGCAAAACCTGCTGTTCCATTAGGAGCAAACTACAGGCTTATTGACATTCCTGTCAGCAACTGTTTAAACAGCAACATATCAAAGATTTATGTTCTCACACAGTTCAATTCTGCATCACTCAATCGCCACCTGTCACGTGCTTATGCAAGTAACATGGGTGGTTACAAGAACGAAGGGTTTGTTGAAGTCCTTGCTGCTCAACAAAGCCCCGAAAATCCAAACTGGTTTCAGGGTACTGCTGATGCTGTAAGGCAGTACTTATGGCTATTTGAAGAGCATAATGTTTTAGAGTTTCTAATTCTTGCTGGAGATCATTTATACCGTATGGATTATGAGAGATTTATTCAAGCTCATAGAGAAACCGATGCTGACATCACTGTAGCAGCTTTACCAATGGATGAAAAACGTGCAACTGCATTTGGACTAATGAAGATTGATGAAGAAGGGCGTATAATTGAATTTGCAGAAAAACCAAAAGGAGAGCAATTAAAAGCTATGAAAGTTGATACCACAATTCTAGGGCTTGATGAAGAGAGAGCTAAAGAAATGCCTTATATTGCTAGTATGGGGATTTATGTTGTTAGCAAAGATGTGATGTTGGATTTGTTGAAAGATAAGTTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATTCCTGGCGCTACATCTATTGGCCTAAGAGTACAAGCTTACCTTTATGATGGATATTGGGAAGATATTGGTACCATTGAGGCTTTCTACAATGCCAATCTGGGAATCACCAAAAAGCCAGTCCCGGATTTCAGTTTTTATGATCGTTCATCTCCTATTTACACCCAACCTCGATACCTTCCTCCTTCCAAGATGCTTGATGCTGATGTCACCGATAGTGTTATCGGTGAAGGATGTGTCATTAAGAACTGCAAAATCCATCATTCTGTTGTTGGTCTTCGATCTTGCATAGCTGAAGGTGCAGTCATTGAAGATTCGTTGCTAATGGGAGCAGATTATTACGAGACGGATGCTGACAGGGAGTTACTTGCTGCAAAAGGTAGCGTTCCAATTGGTATTGGAAAGAACACTCATATCAAAAGAGCGATTATTGACAAAAATGCTCGTATAGGAGACAATGTTAAGATTATAAACAGCGATAATGTTCAAGAAGCAGCAAGGGAAACAGATGGGTATTTTATAAAAAGCGGAATTGTGACGGTTATCAAAGACGCATTGATCCCATCTGGCAGCATAATCTAG | 1557 | 41.81 | MAAVGALKPPHCFSSSGIVANRSHLRSSSTFRSLSFASSHLSGEKVTSVSSVRQRRCGGRTSVIVSPKAVSDSKNSQTCLDPDASQSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLILAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLKAMKVDTTILGLDEERAKEMPYIASMGIYVVSKDVMLDLLKDKFPGANDFGSEVIPGATSIGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCIAEGAVIEDSLLMGADYYETDADRELLAAKGSVPIGIGKNTHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPSGSII | 518 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03165 | 518 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 68 | 383 | IPR029044 | - | |
| Cien5g03165 | 518 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 2. | 183 | 191 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Cien5g03165 | 518 | FunFam | Glucose-1-phosphate adenylyltransferase | 69 | 383 | - | - | |
| Cien5g03165 | 518 | CDD | LbH-G1P-AT-C | 386 | 512 | - | - | |
| Cien5g03165 | 518 | CDD | ADP-Glucose-PP | 99 | 348 | - | - | |
| Cien5g03165 | 518 | FunFam | Glucose-1-phosphate adenylyltransferase | 384 | 518 | - | - | |
| Cien5g03165 | 518 | PANTHER | GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED | 54 | 518 | IPR011831 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Cien5g03165 | 518 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 87 | 479 | IPR029044 | - | |
| Cien5g03165 | 518 | SUPERFAMILY | Trimeric LpxA-like enzymes | 381 | 518 | IPR011004 | - | |
| Cien5g03165 | 518 | Gene3D | Hexapeptide repeat proteins | 384 | 518 | - | - | |
| Cien5g03165 | 518 | Pfam | Nucleotidyl transferase | 90 | 363 | IPR005835 | GO:0009058(InterPro) | |
| Cien5g03165 | 518 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 3. | 295 | 305 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Cien5g03165 | 518 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 1. | 94 | 113 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Cien5g03165 | 518 | NCBIfam | glucose-1-phosphate adenylyltransferase | 88 | 482 | IPR011831 | GO:0005978(InterPro)|GO:0008878(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03165 | K00975 | glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:76496959 | Cien8g01465 | Cien-Chr8:22938420 | dispersed |