Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03181	ATGGCTTCTTCTTCTACTTCTACTTCTACTACTACTTGGACTAAAACCAGAAGCAGATTCTTGTATTCTTCGAAAGATGTATTTGGATCATCTTCTTCTACGATTTCTTTCCGTAAGAAACCCAATGCACAAAATTCAATTGTTTGTGCTCTTCAGACGCCTTCGATTCTTCAGTTTCCAAAACAGTCTGTTAGTAAAAGCTTAAACAATCCCATCGAATTGCCGTCTTCGTCTTCTTCTTCTCCGTCGGTCCAACAAAATTGGAACTTGTTACAGAAAGTTGCAGCGATGGCATTGGACGCCGTTGAAGATGGATTGAAAGCTAGGGAAAAGTTACAGACTTTACCGAAAACAGCAGACCCAAATGTTCAAATCGCCGGGAACTTCAGTCCAGTACCGGAACAACCTGTGCGCCACTGTCTACCTGTCGCCGGGAAGATTCCGGAACATATTCAAGGAGTTTACTTAAGAAATGGAGCCAACCCATTGTTCGAACCTACCTCCGGCCACCATTTGTTTGACGGAGATGGCATGATTTATGCCGTGAAGTTCGATAATGGATCGGCTAGCTACGCTTGCCGGTTCACAGAGACGCAGAGGCTTGTTCAAGAACGTGCTATCGGAAAACCGGTATTTCCGAAAGCCATCGGTGAGCTTCATGGTCATTCTGGCATCGCTAAACTTCTACTGTTTTACGCTCGTGGGTTGTGTGGCTTGATTGACATCACTAAAGGACTTGGAGTGGCGAACGCCGGTTTGGTTTACTTTAACAACCGGCTTTTAGCCATGTCGGAGGATGATTTGCCTTATCACGTGCGGGTCACGCCTTCCGGCGACTTAAAGACTGGCGGCCGATACAACTTCGACGATCAGTTGAAGTCCACCATGATCGCGCACCCAAAGCTCGACCCAGTTTCCGGCGAGCTTTTCGCACTGAGCTACGATGTCATCCAGAAGCCTTACCTCAAATACTTCTGGTTTTCACCAGACGGCAAGAAATCGAAAGACGTTGCGATTGATTTGGGAAAGCCTACTATGGTTCATGACTTCGCGATCACAGAGAACTTCGTGGTGGTGCCGGACCACCAGGTGGTTTTCAAGATGTCAGAGATGATCACTGGTGGGTCACCGGTGGTGTACGACAAAGAGAAGGTATCACGTTTTGGCGTTCTCGATAAATACGCTGAAAACGGGTCGGATATCAAATGGGTCGAAGTTCCGGATTGTTTCTGTTTTCATCTCTGGAACGCGTGGGAAGAACCAGAATCCGACGAGGTCGTCGTGATCGGCTCCTGCATGACTCCGGCGGACTCCATTTTCAACGAATGTAACGAAGAACTCAAAAGCGTTTTATCAGAAATCCGTCTTAATCTAAAAACCGGTAAATCCACTCGTCGACCGATAATTTCTCCTGAAAATGACGTCAATTTAGAAGCAGGGATGGTGAACAAAAACCTCCTCGGCCGGAAATCCAAATACGCATACCTCGCCATCGCCGAGCCATGGCCGAAGGTCTCTGGTTTCGCCAAAGTCGATCTTTCCACCGGCGAGACCAAAAAATTCATCTACGGAGACGAGAAATACGGCGGCGAGCCTCTGTTTCTTCCCAGAGACCCCAACTCCGAAACCGAAGACGACGGCCACATCTTAGCCTTCGTTCACGACGAAAAGACATGGAAATCCGAGCTTCAAATCGTGAATGCAATGACAATGGAATTAGAAGCAACAGTTAAGCTGCCATCAAGGGTTCCCTATGGATTCCATGGAACCTTCATAAACGCCAAAGATTTGGCAACGCAAGCATGA	1806	47.4	MASSSTSTSTTTWTKTRSRFLYSSKDVFGSSSSTISFRKKPNAQNSIVCALQTPSILQFPKQSVSKSLNNPIELPSSSSSSPSVQQNWNLLQKVAAMALDAVEDGLKAREKLQTLPKTADPNVQIAGNFSPVPEQPVRHCLPVAGKIPEHIQGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLIDITKGLGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTGGRYNFDDQLKSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFWFSPDGKKSKDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAENGSDIKWVEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRPIISPENDVNLEAGMVNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDEKYGGEPLFLPRDPNSETEDDGHILAFVHDEKTWKSELQIVNAMTMELEATVKLPSRVPYGFHGTFINAKDLATQA	601

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03181	601	PANTHER	BETA-CAROTENE DIOXYGENASE	113	593	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Cien5g03181	601	Pfam	Retinal pigment epithelial membrane protein	133	592	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03181	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	64402	Cien1g03021	Cien5g03181
	66530	Cien5g03181	Cien9g02339

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cien	Cien-Chr1:35331153	Cien5g03181	Cien-Chr5:76832331	dispersed
	Cien	Cien-Chr4:85786262	Cien5g03181	Cien-Chr5:76832331	dispersed
	Cien	Cien-Chr5:76832331	Cien7g00676	Cien-Chr7:8299305	dispersed
	Cien	Cien-Chr8:11365915	Cien5g03181	Cien-Chr5:76832331	transposed
	Cien	Cien-Chr9:10354125	Cien5g03181	Cien-Chr5:76832331	transposed
	Cien	Cien-Chr1:81366777	Cien5g03181	Cien-Chr5:76832331	wgd
	Cien	Cien-Chr5:76832331	Cien9g02339	Cien-Chr9:47307190	wgd