AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03186 ATGGGGAATAAGTTGGGTAGGAGGAGACAGCTAGTGGACGAGAAGTATACACGGCCGCAAGGGCTGTATCAACACAAGGATGTAGATCACAAGAAGCTTCGTAAGCTTATACTTGATTCCAAGCTCGCCCCTTGCTATCCCGGAGACGACGACTGCAGTTGCGATCTTGAAGAATGCCCAATCTGCTTCCTGTATTATCCAAGCCTAAATAGATCGCGATGTTGCACGAAAGGCATCTGTACAGAATGTTTCCTACAAATGAAGACCCCAAATTCTACACGCCCTACGCAATGTCCCTTTTGTAAAACGTTAAACTATGCCGTAGAGTACAGAGGCGTGAAGACAAAAGAGGAAAAGGGGCAGGAACAAATTGAAGAACAAAGAGTGATTGAAGCAAAAATAAGAATGAGACAGCAAGAAATTCAAGATGAAGAGGACAGAATGCTAAAAAGGCAAGAGAGAAGCTCTTCAAGCAGGATAACTGATCCAAATGAGGCTGAATATTTTTCTAGAGCAGCAACATCTTCTTCAGAAAGTGATGAAATTGTTTCTGCTCCTAATGTCGCGACAATTAGACATCCTACACGACCTAGGGACAACAGAGATGACGAGTTTGACCTTGACCCCGAAAACATAATGCTAATGGAAGCCATCTGGTTATCCTTTCAGGAAGACGGGAAACACCAGCGCCACAACCCTAACTATGGCGACGCGGCACAACTAGCAAAATACGCGACCGAAGTTCGCATATTAGCATCCATGGCCCCACAACCGGAACAACCATCATCGTCAACATCATCATCATCATCATCACCATCACCTTCCGGTGGTCTAGCATGCGCGATAGCGGCCCTCGCGGAACGCCAACAAATCGGCGGCGGTGAATCCTCCACCAATTACCACAACTACACCGGCAACACATCCACATACAACATCATGCATCCCGAGCACACCACCTCACTCAACACCCATCTTCAAGATTCACACTGGGACGACAACAACAACAACAGCAACAACAACAGCAGCCATGAACAACAACAACAACAACAAATGGTTGAAAGTGGGACCCGATTTGGGTATGATGATGGTGGTGTATATGGGGGACATGGTGAGATGGAGAATGGTTATGGGAATGTGAATGTGAATGGGAGTATAGTTCCGGAGAGCTTTGAAGAACAGATGATGTTGGCAATGGCGGTTTCACTGGCGGAAGCTCGGGCTAGGAGTAGTAGTGCACCGGAAGTTGCGTGGATTTAG 1257 46.78 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEDRMLKRQERSSSSRITDPNEAEYFSRAATSSSESDEIVSAPNVATIRHPTRPRDNRDDEFDLDPENIMLMEAIWLSFQEDGKHQRHNPNYGDAAQLAKYATEVRILASMAPQPEQPSSSTSSSSSSPSPSGGLACAIAALAERQQIGGGESSTNYHNYTGNTSTYNIMHPEHTTSLNTHLQDSHWDDNNNNSNNNSSHEQQQQQQMVESGTRFGYDDGGVYGGHGEMENGYGNVNVNGSIVPESFEEQMMLAMAVSLAEARARSSSAPEVAWI 418
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03186 418 MobiDBLite consensus disorder prediction 256 276 - -
Cien5g03186 418 MobiDBLite consensus disorder prediction 161 184 - -
Cien5g03186 418 MobiDBLite consensus disorder prediction 323 371 - -
Cien5g03186 418 MobiDBLite consensus disorder prediction 323 355 - -
Cien5g03186 418 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Cien5g03186 418 MobiDBLite consensus disorder prediction 139 206 - -
Cien5g03186 418 MobiDBLite consensus disorder prediction 254 277 - -
Cien5g03186 418 PANTHER PROTEIN SIP5 1 350 IPR039301 GO:0005737(PANTHER)
Cien5g03186 418 MobiDBLite consensus disorder prediction 139 160 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03186 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
64403 Cien1g03024 Cien5g03186
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:81488048 Cien5g03186 Cien-Chr5:77010986 wgd