Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03188 | ATGGCTTCTTTGCTACCTCTTACCACCTTCACCACCACCACAAGAACAAAGCCAAATTCCACCTCCAGCCGCCGTTTCAAGACTTTCCCCAAACAAACCCACCGCTTGAAAGTCTCATGCAACGTCGCACCAGATGATAATGAGAAGCTACTCCTAGTCCCCGAAACCCAAAACCTTATATTGCCCAAAACATCTGTCGACACTCTTAATGTGGATCGAAGGAATTTGCTCCTGGGACTCGGCGGCCTTTACAGCACCGTCAACTTCAGTTCCATTCCGGCAGCCTTTGCATCGCCTATCACGACACCTGAAATCTCCACATGCGTGCCGTCAACTGAAGGTTTCAACACGGATGACTCCGTAAGAAGCAACCAATGTTGTCCGCCGGCAATGTCAACAACCCCCAAAGACTTTGTGTTCCCTAAAGACACAACGATCCGGGTTAGACCAGCGGCACATAGAGCCAGTGCCGACTACGTGGCAAAATACAAAGCAGCAATCAAAGCCATGAGAGACCTCCCAGATGAACACCCACATAGTTTCGTCCAACAAGCGAGAATTCATTGCGCTTACTGCAACGGGGGTTACAGTCAAATCGCGAGTGGTTTTCCTGACAAGACTCTACAAATTCACAACTCATGGCTCTTTTTTCCTTTCCATCGTTGGTACTTGTATTTCTACGAGAGAATCCTCGGGAAGTTAATTGATGATCCCACTTTCGCTTTACCTTACTGGAACTGGGACGTTCCCAGCGGAATGGGTGTTCCAGCATTTTTCGAAGAGGACGGCAAGAAAAACCCTGCCTTTGACGCGTTCCGCAACGTCAACCATGTATCAGCAGCAGCAATCGTTGACCTCGACTACAATGGTTCAGATAGTGGCGCTACTTGTCTTCAACAGATAAGCACCAATCTTGGTGCAATGTATAAGCAGATGGTCAGCAACGCCGCTGACCCATTGAGCTTCTTCGGTGGCGAGTTTCGGGCTGGGGACGACCCCTATGGGAATGGTGACCCATCTATCGGGTCAATAGAGGCTGGTTGTCACACTGCGGTGCATAGATGGGTGGGTAACCCAAGAATGCTAAACAACGAGGACATGGGGAACTTCTACTCTGCGGGGTATGATCCTTTGTTCTACGTCCACCATGCCAATGTCGACCGTATGTGGAAAGTGTGGAAGGACTTGGGCATCCAAGGACACTCTGAACCTACAGACCCCGATTGGCTTAACGCATCATATGTGTTTTATGACGAAAACGAAGAGCTTGTACGTGTTTACAACAAAGATTGTGTCCAAATCGAAAACCTAAAATACGATTTCGAAGTGTCCCCACTCCCGTGGTTCTCGAGCCGTCCGGTTGCACATAAAAAGATCTCAAACACCTCCTCCACCTCCAGTTCCGCTGAAGCGGTTCAAAAAGTGCCGGACGTCAAGTTCCCGGTAAAGCTAGACAAGATAACGAAGGTCCTGGTGAAGAGGCCAGCCACAAAACGAAGCCAAGCGGACAAGGAGAAAGCGTCTGAGCAGTTGGTGATTAAAGGAATCCAATTCAATTCCCAGAAGTTCGTTAAGTTTGATGTGTTTGTGAATGACAAAGATGATGTTCCTGCAAGCTCAGCATCGGAGAGCGAGTTTGTAGGTAGTTTCGCGCAGTTGCCGCATCACCATCGCCACAAAAAGTTAATGAGGAGTGCGGCAAGGTTCGGTTTAACAGAGCTTTTGGAGGACATCGGCGCCGAGGATGATGAGTATATCTTGGTGACATTGGTGCCAAAGGTAGGGACTGAGGAACTCACCATTGACGAAATCAAGGTGGAATTTGTTCCTCTTAAGTAA | 1839 | 48.67 | MASLLPLTTFTTTTRTKPNSTSSRRFKTFPKQTHRLKVSCNVAPDDNEKLLLVPETQNLILPKTSVDTLNVDRRNLLLGLGGLYSTVNFSSIPAAFASPITTPEISTCVPSTEGFNTDDSVRSNQCCPPAMSTTPKDFVFPKDTTIRVRPAAHRASADYVAKYKAAIKAMRDLPDEHPHSFVQQARIHCAYCNGGYSQIASGFPDKTLQIHNSWLFFPFHRWYLYFYERILGKLIDDPTFALPYWNWDVPSGMGVPAFFEEDGKKNPAFDAFRNVNHVSAAAIVDLDYNGSDSGATCLQQISTNLGAMYKQMVSNAADPLSFFGGEFRAGDDPYGNGDPSIGSIEAGCHTAVHRWVGNPRMLNNEDMGNFYSAGYDPLFYVHHANVDRMWKVWKDLGIQGHSEPTDPDWLNASYVFYDENEELVRVYNKDCVQIENLKYDFEVSPLPWFSSRPVAHKKISNTSSTSSSAEAVQKVPDVKFPVKLDKITKVLVKRPATKRSQADKEKASEQLVIKGIQFNSQKFVKFDVFVNDKDDVPASSASESEFVGSFAQLPHHHRHKKLMRSAARFGLTELLEDIGAEDDEYILVTLVPKVGTEELTIDEIKVEFVPLK | 612 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03188 | 612 | Pfam | Common central domain of tyrosinase | 179 | 395 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | Pfam | Protein of unknown function (DUF-B2219) | 480 | 608 | IPR022740 | GO:0004097(InterPro) | |
| Cien5g03188 | 612 | Pfam | Polyphenol oxidase middle domain | 404 | 453 | IPR022739 | GO:0004097(InterPro) | |
| Cien5g03188 | 612 | PANTHER | TYROSINASE FAMILY MEMBER | 71 | 576 | IPR050316 | - | |
| Cien5g03188 | 612 | PRINTS | Tyrosinase copper-binding domain signature | 242 | 247 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | PRINTS | Tyrosinase copper-binding domain signature | 375 | 393 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | PRINTS | Tyrosinase copper-binding domain signature | 211 | 228 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | PRINTS | Tyrosinase copper-binding domain signature | 348 | 359 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | Gene3D | - | 98 | 444 | IPR008922 | - | |
| Cien5g03188 | 612 | SUPERFAMILY | Di-copper centre-containing domain | 100 | 448 | IPR008922 | - | |
| Cien5g03188 | 612 | PIRSF | PPO-plant | 1 | 610 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Cien5g03188 | 612 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 211 | 228 | IPR002227 | GO:0016491(InterPro) | |
| Cien5g03188 | 612 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 376 | 387 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03188 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 66532 | Cien5g03188 | Cien9g02335 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr1:81537008 | Cien5g03188 | Cien-Chr5:77159262 | dispersed | |
| Cien | Cien-Chr2:44323962 | Cien5g03188 | Cien-Chr5:77159262 | dispersed | |
| Cien | Cien-Chr5:77159262 | Cien9g02336 | Cien-Chr9:47251517 | dispersed | |
| Cien | Cien-Chr5:77078011 | Cien5g03188 | Cien-Chr5:77159262 | tandem |