Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03219	ATGGCGTCTTCCGATCATCGTTGCCGCCATGACTCTGTTCCAATGTTATCGCCACCGCCATTGCCGGAAGTTGTCCTTACAGCGTCTCCTGACGGACCAATCACCGCCTATGATCCGTACTCTGGAACTGTTGTAGGTCGCTTCAACGGCAACCGGTGTCCACGAAATGGCATCTGCATTCTCGGAAACGACGTATTCGCCGTTACTCATATTTCGCCGGAGACTGGTGCAGGTTCCGTCCATATCTATTACTGGTGGTCAACGTCATGTATAAAGAGTGTTCCTCTTCCGGAACCTGTAGCTCCACTTGTTGCTTCCGTTGATGGATCGTATATATTTTCCGGCGGAATCTCAGGTCAGATCCATTCGGTAGTGGTAGATTCAGGAGACGTAATCCGGTCGTTTCCTGCTCATGAGAAACCTGTATCTTGCCTCGCAATCAATTATGATGGATCGTTGATTCTCTCAGGAAGTGATGACGGAACGATCGCTGTTATCCCTATATTCCTGCTTCTAGATGCTTCATTTGATGCAGATTCGAGATACTCGAGTTACACCAGGTTCACCGGACATGAATCATCGGTGACGGGATTAACCACCGGCGTCGGAAGATGCGGTGGGATTATGATCTCTTGTTCCTTGGACTGTACGTGCAAGGTGTGGACCCTCGTGAACGGGATCCATCTACAAACGGTGAGATTCCCCGACGAGGTGTGGTGCATGGTGTTGAATCCGTCGGAGACGGAGTTGTTTGTTGCAGGAATAGAAGGAATGATATATAAAAGAAAGCTTAAAGTAGACATGAGAAAGCAAGTTGCGGGAGGAGGAAAGACGGTGGTGTGGGCCAAAATGCATGGCGGAGGAGTGGTGGCGATGGAAATGTTGGGCTACGGGAGGATTCTTTTGACGGTATCTGAAAACGGTGAAATTTGTGCATGGCAGGTGGACGGTGGTAAGATGATGTGTGGATTTGGTGAGAAGATTGGAGGTGTTAGTGGAGTTGTGGTGGCAAATGGTGATGGTGGTTTTGGAAAGAGAGAGGTTGGAAGTGGGGAATGCGGTGGTTATGGCGGCGGGGAGGAGATGGGTAAGGCGGTGAAGGAAGTGGCGGAAATGGAAGACGCTTTGAAAGTGGCGGTGGAAGACCGGAGCCGGGCGATTAGTAATCTTGAGTCGGCAATTGAGATTAACGAAAAGATGCTGAAACTCATGCTGAGGGAAGCCAAGGCAATTGCGAAATTTAATGACTCCAGTAATAATTAA	1263	49.25	MASSDHRCRHDSVPMLSPPPLPEVVLTASPDGPITAYDPYSGTVVGRFNGNRCPRNGICILGNDVFAVTHISPETGAGSVHIYYWWSTSCIKSVPLPEPVAPLVASVDGSYIFSGGISGQIHSVVVDSGDVIRSFPAHEKPVSCLAINYDGSLILSGSDDGTIAVIPIFLLLDASFDADSRYSSYTRFTGHESSVTGLTTGVGRCGGIMISCSLDCTCKVWTLVNGIHLQTVRFPDEVWCMVLNPSETELFVAGIEGMIYKRKLKVDMRKQVAGGGKTVVWAKMHGGGVVAMEMLGYGRILLTVSENGEICAWQVDGGKMMCGFGEKIGGVSGVVVANGDGGFGKREVGSGECGGYGGGEEMGKAVKEVAEMEDALKVAVEDRSRAISNLESAIEINEKMLKLMLREAKAIAKFNDSSNN	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03219	420	SUPERFAMILY	Quinoprotein alcohol dehydrogenase-like	24	319	IPR011047	-
	Cien5g03219	420	SMART	WD40-4	275	314	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	SMART	WD40-4	128	167	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	SMART	WD40-4	181	222	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	SMART	WD40-4	225	263	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	Pfam	WD domain, G-beta repeat	186	221	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	Pfam	WD domain, G-beta repeat	130	164	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	PANTHER	WD-REPEAT PROTEIN 18	22	337	IPR045227	GO:0005656(PANTHER)\|GO:0006261(PANTHER)\|GO:0006364(PANTHER)\|GO:0097344(PANTHER)
	Cien5g03219	420	Gene3D	-	19	165	IPR015943	GO:0005515(InterPro)
	Cien5g03219	420	ProSiteProfiles	Trp-Asp (WD) repeats profile.	135	165	IPR001680	GO:0005515(InterPro)
	Cien5g03219	420	Gene3D	-	170	341	IPR015943	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03219	K14829	pre-rRNA-processing protein IPI3

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cien	Cien-Chr5:77605004	Cien8g01967	Cien-Chr8:29460091	dispersed