Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03221	ATGTCTGTTTGTCCGTGGTGCATAGTACATTTTCCTCAAACATCAATTTCAAATACTTGTATAAATTTTATTGCCAGAAAACCAAAAAGTGTTTTCATTCCTCCCTCCTTCTCTGTCTCCATCTCTCTCTGCAATTTATTGTTTTTGCGAGGGAGATTGAAAATGGAGTTGAGGGCAAGTAGCGAGTTGCGTTTGTTATTAGTAATTATTAGCATTATATCGCCATTAATGGAGTTTGGAGCAGCAATCAAAGCCGATGCAGCAACGATCGGATGTGATTTGTTCCAGGGAAATTGGGTATTGGATCAAACTTATCCATTCTACAATGAATCCACCTGCCCTTTCCTTGAAAAAGAGTTCAACTGCGTCAACAATGGCCGCCCTGACCGTTTGTATCTCAAATACCGGTGGCAACCCCATGGCTGCCGCTTATCCAGATTTGATGGTCGAAACTTCTTACAAAAACTAAGAGGGAAAACAATAATGTTTGTAGGAGATTCACTCAGTCGAAACCAATGGTTATCACTACTATGCATGATTCACTCATCCGTACCAACTGCAAATTACGCCGTTAATATCTCTATACCTCAAGATATGACCACATATACATTTACGGATTATGGAGTGAAAGTGATATACCATCACAACTTGTACCTAGTGGATATAGTGAAACAAAGAATTGGGAGAGTGTTGAACTTGGATTCACTGACAGCTGGCAAACTATGGTTGGATGTCGAGTACCTTGTGTTCAACACGTGGCACTGGTGGAACCGTAGAGGAGCCAGCCAACCATTTGATTATATACGAGACGGAGGTCGTGTTTACAAGGACATGGATCGTGTAGTTGCTTTCGGAAAGGCCATTACTACATGGGGTCAATGGATTGATGCCAATATTGTTCCGAATAAAACAAAAGTGTTTTTTCAAGGAATATCACCATCTCATTACAACGGCACCGATTGGGGACAACCGAAGGCAAAATCCTGCTCCGGCCAGAAAATTCCTCTTCTGAGCACTACCTATCCCGGAAGCTCGCCGCCGGCGTTGGCGGTCCTCAAGAAATCGCTCAAAACCATCAAGAAACCGGTGACTTTGCTCGACATTACTTACCTTTCTCTCTTGCGGAAAGACGGCCATCCGTCGGCGTATGGGTTAGGGGCGGTGGATTGCAGCCACTGGTGCCTCGCCGGAGTTCCGGACACTTGGACTCTTTTGCTTTACAATCTTATGTTTTAG	1236	43.77	MSVCPWCIVHFPQTSISNTCINFIARKPKSVFIPPSFSVSISLCNLLFLRGRLKMELRASSELRLLLVIISIISPLMEFGAAIKADAATIGCDLFQGNWVLDQTYPFYNESTCPFLEKEFNCVNNGRPDRLYLKYRWQPHGCRLSRFDGRNFLQKLRGKTIMFVGDSLSRNQWLSLLCMIHSSVPTANYAVNISIPQDMTTYTFTDYGVKVIYHHNLYLVDIVKQRIGRVLNLDSLTAGKLWLDVEYLVFNTWHWWNRRGASQPFDYIRDGGRVYKDMDRVVAFGKAITTWGQWIDANIVPNKTKVFFQGISPSHYNGTDWGQPKAKSCSGQKIPLLSTTYPGSSPPALAVLKKSLKTIKKPVTLLDITYLSLLRKDGHPSAYGLGAVDCSHWCLAGVPDTWTLLLYNLMF	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03221	411	Pfam	PMR5 N terminal Domain	91	142	IPR025846	-
	Cien5g03221	411	Pfam	GDSL-SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p	144	408	IPR026057	GO:0016740(InterPro)
	Cien5g03221	411	PANTHER	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	70	409	IPR029962	GO:0005794(PANTHER)\|GO:0016413(InterPro)\|GO:0016413(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03221	K23877	xyloglucan O-acetyltransferase

Event-related genes

Select	Gene_1	Gene_2	Event_name
	64385	Cien1g02921	Cien5g03221

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cien	Cien-Chr5:32219176	Cien5g03221	Cien-Chr5:77606713	dispersed
	Cien	Cien-Chr5:77606713	Cien8g01110	Cien-Chr8:17946897	dispersed
	Cien	Cien-Chr3:38948445	Cien5g03221	Cien-Chr5:77606713	transposed
	Cien	Cien-Chr1:79517913	Cien5g03221	Cien-Chr5:77606713	wgd