AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03234 ATGGCCGACATCGAAACCCTAGGTATTCTGGAAGAGATCCAAGCACTCGTCTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGCTGAGTCGGAACTTTTTGGTACCATCAAATACTGCCAAGAAACTCCTTCAAGAGTTCGTGGAAAAGAATGGATCTCAACTGGAAGTTTTATATTCTTTATCTGGATTTTTGAAGAAAAATCCTTCAGTCTACCATATAAAGCTTGTTTTGAGCTCTAAACTTTCAGAAGCCAAAGAAGAATTTAGTGACAATTGTTCAGTTCAAATCTACAGTGTCCAAGCTTCAATCCCTAAAGATCCAGCAGTACTTTGGAATGCTGAATTTATACAAGCAGAAGAGCTCTTCAAAGAGCCCCCTAATGTTCTTAATTGCTTACGTGACAACAGGTTTTGTGGGGTTTCAAATTCATTTGTGAAACGCAATACTGAGGGAACACCTATAAACAACACAACTTCACTTCAAGAAAAAAAAGTTGAACAATCAAACCCTAAACCTGATAAGGGCAAAGATGTCCAAAACGGAAGTCATAAGGCACAAGTCCTTAAACAGGAGGTCAAACCAGTTCCACAAAAAGAACAAGCCCCTCAATTACCAAACAAAAAGAAACCCCAAAATGATAAAACCTCTTCTGGAACTTCAGGCTCATTAGCTAGCATGTGGGGCCGTGCATCTGCAAAACCAAAACCAAATCCCGAAACTGCCCCTGTAAAAACTGAAAACTCCATTCCCATTTCCAATGATGCTCAAGTTCTTGAAAATGAAATGGTGGAAAATGATAGCAGTGATGATGAAAATGATCAAATGAAGTTTAAAAGAGGTTCTAATGGTGAAGGGAGTAATAGAAAAAGAAGGGTTGTGTTTGATTACTCTGATGAAGATGATGAAGAAAAAGATGCAGTGAGTTTAGCCTCACCAGATCCTCCAAAAAAGCAAGTTTCTGTTGATTTAAAGACTAAAAAATCGAGTCTTGAAAATAAGAACTTGGATTTTGAGGAATTAAAGAAAGAGAAAGATGTTGATAGTAAAAATATATTGAAAGAAGAAAGTCATGACAGGAAAAAGGGGAATCAGATTTCAAATGAGAATTTATGTGCTGAAAAAAGTGATGAAGAACAGAAGAATAAAGGGAGTGATGCTGCTAAAAATGCAAGTAAAAAGAGAAAAGTTTTGAAGACACGGATCGATGAACGTGGGAGAGAAGTAACTGAAGTTGTTTGGGAGGACGATGAGAGAGAGACAAAGCCTGATGAAAATACAAAAAAAGATAAAACCGAGAATAATACCACCACCAACAATGTTTCCAATAGGCCTCTTGCAACAGCTCCCAAGAAATCACCCGCGGTCGGAAACGCCCATTCCAATCCAACAGGCAAGACCGGAAACAAGAAAGCCGGTTCCAAGGATCCTAAACAGGGGAATATCATGTCCTTTTTCAAGAAGAAATAA 1470 38.37 MADIETLGILEEIQALVSDKLQVVSYKWLSRNFLVPSNTAKKLLQEFVEKNGSQLEVLYSLSGFLKKNPSVYHIKLVLSSKLSEAKEEFSDNCSVQIYSVQASIPKDPAVLWNAEFIQAEELFKEPPNVLNCLRDNRFCGVSNSFVKRNTEGTPINNTTSLQEKKVEQSNPKPDKGKDVQNGSHKAQVLKQEVKPVPQKEQAPQLPNKKKPQNDKTSSGTSGSLASMWGRASAKPKPNPETAPVKTENSIPISNDAQVLENEMVENDSSDDENDQMKFKRGSNGEGSNRKRRVVFDYSDEDDEEKDAVSLASPDPPKKQVSVDLKTKKSSLENKNLDFEELKKEKDVDSKNILKEESHDRKKGNQISNENLCAEKSDEEQKNKGSDAAKNASKKRKVLKTRIDERGREVTEVVWEDDERETKPDENTKKDKTENNTTTNNVSNRPLATAPKKSPAVGNAHSNPTGKTGNKKAGSKDPKQGNIMSFFKKK 489
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03234 489 MobiDBLite consensus disorder prediction 372 432 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 149 166 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 205 227 - -
Cien5g03234 489 Coils Coil 324 344 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 433 447 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 149 330 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 344 365 - -
Cien5g03234 489 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 147 IPR041913 -
Cien5g03234 489 MobiDBLite consensus disorder prediction 344 489 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 242 263 - -
Cien5g03234 489 Pfam DNA polymerase subunit Cdc27 23 489 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Cien5g03234 489 MobiDBLite consensus disorder prediction 455 469 - -
Cien5g03234 489 MobiDBLite consensus disorder prediction 167 181 - -
Cien5g03234 489 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 489 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER)
Cien5g03234 489 MobiDBLite consensus disorder prediction 270 298 - -
Cien5g03234 489 FunFam DNA polymerase delta subunit 7 149 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03234 K03504 DNA polymerase delta subunit 3