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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03235 ATGGGTTGTTCCGGATCGTCACTAAATAAACAAAACAGAAAGGTGAAAAAGATAAGGAAGCCAAAGCCATGGAAGTTTCCACGGCCGGTGACGTGGAGTCAGCTTGTGCAGATGCGTGATGAGTTTTGGGATACGGCTCCACACCATGGTGGCAAGAAAGAAATCTGGGATGCGATACATGCAGCAGCCGAGGCAGACATAGAGCTTGCCCAAGCAATTGTGGACAGTGCAGGCGTCATTGTTCATAAGCCCGATATGACTGTTTGTTATGATGAGAGAGGTGTTTTACATCTCTTTTCCTTTCATATCGCTTCACTGGGTTGTACTAAATATGAAGTACCAAGGTACGTGTTGAGCGAGCCAACAAACTTGATACAACTAAGCTGA 387 45.74 MGCSGSSLNKQNRKVKKIRKPKPWKFPRPVTWSQLVQMRDEFWDTAPHHGGKKEIWDAIHAAAEADIELAQAIVDSAGVIVHKPDMTVCYDERGVLHLFSFHIASLGCTKYEVPRYVLSEPTNLIQLS 128
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03235 128 Pfam Ubiquitin-binding domain 16 126 IPR032752 -
Cien5g03235 128 Gene3D - 31 103 IPR038169 -
Cien5g03235 128 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 125 IPR039869 -
Cien5g03235 128 MobiDBLite consensus disorder prediction 1 23 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03235 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:77725343 Cien8g01060 Cien-Chr8:17284395 dispersed