Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03236 | ATGAGCTCTTCGTTACTTTATCTGATTTTCTCAACTCTCGTTTCCATTTACGTGTTCCAGTTTCAAGCTCAAGCTGCTCCTGCTGCTCCGGTGATTAAGCAATTATCTTCCATACTCAAATGGACAGCTAGGTCTTCTTCCAAATCACCATTATCAGATGGGAATATTCTTCAATTTGAAGATGGATATTTAGTAGAAACCGTCGTAGAAGGGAATCAGCTAGGCGTCGTGCCTTATTCCATCAGAGTCTCGCAAGATGGTGAACTCTACGCTGTTGATGCAGTCAATAGCAACATCGTTCGAATCACTCCTCCATTATCTCAATATAGTAGGGCAAGATTGATTGCCGGATCCTTTCAGGGTTACACAGGACACGTAGATGGAAAATCAAATGATGCTCGCTTTGATCATCCAAAAGGTGTTACAATGGACGATAAAGGGAATGTTTATGTTGCTGATACTTCTAATCTTGCCATTAGAAAGATCGGTGAAGCAGGTGTGACAACAATTGCTGGAGGAAAATCGAATGTAGCAGGATACAGAGATGGCCCAAGTGAAGATGCACAGTTTTCATCTGATTTTGATGTAATTTATGTGAGACCAACATGTTCATTGCTAGTTATTGATCGAGGAAATGCTGCTCTTAGACAAATTTCTCTCAATCAAGAAGATTGTGATTTGCACTACACCTCTGTCTCTTCCACAGATATTGTTTTGGTAATTGGTGCTATCGCAATAGGATATGTTGTATGCATGATTCAGCAAGGATTCGGCTCATCATATTTCTCAAAAGTGGAAAAGGTGGAGAGTGATAGTAGTAGTAAACTACAAACCAAAGAAAAACCCTCAAAAATCACAAAAAATATAGAAAGTGTGAGGGAAGAACAAGAAGCGGGCTGGCCGTCTTTCAGCCAGCTCATTCTTGATCTTTCCAAATTAGCCCTCGAAGGCTTCACCAACATCTTTTCCTTCAACCCGTTTCAAACAAAGAAAACGGGCCTCACCCCATTAAAAGATTCTTTAATCATGCCCGAAGATGAGCCCCTTTTAGTTCAAAAACACACAACTTCAGCCCCTGTTTCAGAAACCCATCATAAAGAAACAAAGCCCGCGAAACTGAGGTCATTAAAAGATCCTTTAAAGCATCGGGTTTCAAAGAGGGAAGAGTATGCGGAGTTTTATGGGGCGAGTGGTGGTGGTGGTGGTGTTGTGGGCCCACATGTTCGGTCAAAAAGTCAAAAGGAAAGGACAAAGCATCGGGTTAGGGATAAGGAGAAAGTTGTGTATGGGGAGCAGAAGACGGTTGACTTGAAGCAACCGGTCAACTATGAGGACGGGAAGTTTAGTTATATGAGGAATAAGTATGGTGAATCGTATCGTTATACTTGA | 1389 | 41.61 | MSSSLLYLIFSTLVSIYVFQFQAQAAPAAPVIKQLSSILKWTARSSSKSPLSDGNILQFEDGYLVETVVEGNQLGVVPYSIRVSQDGELYAVDAVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKSNDARFDHPKGVTMDDKGNVYVADTSNLAIRKIGEAGVTTIAGGKSNVAGYRDGPSEDAQFSSDFDVIYVRPTCSLLVIDRGNAALRQISLNQEDCDLHYTSVSSTDIVLVIGAIAIGYVVCMIQQGFGSSYFSKVEKVESDSSSKLQTKEKPSKITKNIESVREEQEAGWPSFSQLILDLSKLALEGFTNIFSFNPFQTKKTGLTPLKDSLIMPEDEPLLVQKHTTSAPVSETHHKETKPAKLRSLKDPLKHRVSKREEYAEFYGASGGGGGVVGPHVRSKSQKERTKHRVRDKEKVVYGEQKTVDLKQPVNYEDGKFSYMRNKYGESYRYT | 462 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03236 | 462 | Pfam | NHL repeat | 135 | 161 | IPR001258 | GO:0005515(InterPro) | |
| Cien5g03236 | 462 | MobiDBLite | consensus disorder prediction | 401 | 425 | - | - | |
| Cien5g03236 | 462 | Gene3D | - | 21 | 220 | IPR011042 | - | |
| Cien5g03236 | 462 | PANTHER | - | 18 | 460 | - | - | |
| Cien5g03236 | 462 | SUPERFAMILY | NHL repeat | 68 | 217 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03236 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr4:66055081 | Cien5g03236 | Cien-Chr5:77727675 | dispersed | |
| Cien | Cien-Chr5:77727675 | Cien8g03268 | Cien-Chr8:61768931 | dispersed | |
| Cien | Cien-Chr5:77727675 | Cien3g02561 | Cien-Chr3:69922311 | transposed |