AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03242 ATGGAAAATTTAAAGATCGATGAAGCAATACAAAAAGCTGGAGAAAAGTATAGATCGTTCCTCCATGAAGAAGCTGATAACACCCATTGGAGACATGGCGGCCCTCCTATCTATGATGCCGTTAACAAACTCTTTGAAGAAGGCCGGACCAAGGTTTGGGAAAAAGGATCACTAGAAGAAACAGTTCAAAACGCAATAAAGTCATGGGAGATGGAGCTCAGCCACAAGACTCGGATACAAGACTTTAAAACAATTAATCCTGATAAGTTCAAGCTTATTGTCAATGGGAAGGAGGGATTGTCGGCGGAGGAAACACTGAAGGTGGGGAGTTACAATGCATTACTGAAGAGTACACTTCCGGCAGAGTTGCAGTACTACAAAGCAGAAGAAGAGACCTTCGAATCGTCTCACGACGTTTTCCGGTCGGCATTTCCTCGTGGATTTGCGTGGGAGGTGATAAGCGTTCATTCTGGACCGCCGGTGATCTCTTACAAATTCCGGCATTGGGGTTACTTCGAAGGTCCGTTCAAAGGCCATGCACCTACCGGCGAAATGGTTGATTTCTACGGCATGGGTATCCTCAAGGTTGATGAATCATTGAAAGCAGAAGATGTTGAGGTCTATTATGATCCAGCAGATCTTATCTCGAAGCTGCTCAAGGGACCGTTGACTTCCGAACAGCAAAATAACGCCGCGGATGCTTCTCCGGCGATCACCGGTAGCTGCCCCTATCAGAAGCAAGCGTGA 747 46.59 MENLKIDEAIQKAGEKYRSFLHEEADNTHWRHGGPPIYDAVNKLFEEGRTKVWEKGSLEETVQNAIKSWEMELSHKTRIQDFKTINPDKFKLIVNGKEGLSAEETLKVGSYNALLKSTLPAELQYYKAEEETFESSHDVFRSAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPFKGHAPTGEMVDFYGMGILKVDESLKAEDVEVYYDPADLISKLLKGPLTSEQQNNAADASPAITGSCPYQKQA 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03242 248 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 9 244 IPR053218 -
Cien5g03242 248 Gene3D - 122 222 - -
Cien5g03242 248 MobiDBLite consensus disorder prediction 226 248 - -
Cien5g03242 248 SUPERFAMILY NTF2-like 132 218 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03242 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr4:85351740 Cien5g03242 Cien-Chr5:77792026 dispersed
Cien Cien-Chr4:85379098 Cien5g03242 Cien-Chr5:77792026 dispersed