Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03255 | ATGGCATCTCCTTATTCCATCTCTTTAACTTCCTTTCTGCTTTTGCTCAGCTTTCAACTATTTTCCACCGTTTCTGAAGCTGTTGTGCCTGCATCAGACACCTTCACTTACGTAAACGAAGGTGACTTTGGCGATTATGTGGTCGAGTACGATGCAGATTATCGTACTCTTCCACCATTTAATAATCCATTTCAGTTATGCTTCTACAACACGACCCCGGACGCATTCACCCTAGCTCTACGTATGGGTACGGTCCGATCGGAGTCGCTCATGCGTTGGGTTTGGGAAGCTAACCGGGGGTATCCGGTTCATGAGAATGCCACCCTCACCTTTGGTACAGATGGAAACCTTGTCCTGGCGGAAGCCGATGGCCGGATTAACTGGCAAACTAATACCGCCAACAAGGGTGTCGTCGGTTTTCAGGTGCTGCCGACCGGTAACATGGTTCTTCACGATGGCAAGGGTAATTTCATATGGCAAAGCTTCGATTCGCCAACCGATACTCTCCTTGTCGGTCAAACCCTCCGAGCTGGTGGTGCCAGCAAGCTGGTTAATCGGTTTTCGGCGCAGAACAACATCGATGGACAGTATAGCTTGGTTATGGAGCCTAAACACCTAGCCTTGTATTACACGAGCTTCAACTCGCCTCGCCCAATGCTTTATTGGACATCTATCGAATGGTTCAACGTTGACGTTGCTACAGTGACCGATGGTAGTTTGGTCAATTTAACTCTTACTTCCGTACCAGATACCCCTGAAGGTTTTCTGTATTATTTAACTTTCTTGTATTACATCACAAACCCTCCGTCCGGTTGGAATCGCAACATGGCCTATTCACGATACAACAACACGTTATCGTATCTTCGACTAGGGATGGACGGAAACCTTAGATTCTACACATATAACCCAAATGTGCAAGGCGTGGCCTGGGAACTGGTGTACACATTTCTCGACCGGAATTCCATTGAAGGAGAGTGCCAGTTGCCGGAACGATGTGGAAAGTATGGGCTATGTGAGAATAGCCAATGTGTCGCCTGCCCAACACCAAACGGACTAAGCGGGTGGAGCAAAGATTGTGAGGCAAAGGTGACATCTTGTAAAGCTAGTGAATTTAGCTACTACAAACTTGAAGGCGTTGACCATTTTATGATTAAGTACACAAAGGGAGATGGGGGAAGGAAGCAAAGCGACTGCGAGAGCAAATGCACCAAGGACTGCAAGTGCATGGGATATTTCTACCACACACAAGGATCGAGGTGCTGGATTGCATACGATCTGAAAACATTAACAAGAGTCGGGAACTCGACTCATTTGGCGTACATCAAAGCACCTAAGAAGTAG | 1341 | 47.2 | MASPYSISLTSFLLLLSFQLFSTVSEAVVPASDTFTYVNEGDFGDYVVEYDADYRTLPPFNNPFQLCFYNTTPDAFTLALRMGTVRSESLMRWVWEANRGYPVHENATLTFGTDGNLVLAEADGRINWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQTLRAGGASKLVNRFSAQNNIDGQYSLVMEPKHLALYYTSFNSPRPMLYWTSIEWFNVDVATVTDGSLVNLTLTSVPDTPEGFLYYLTFLYYITNPPSGWNRNMAYSRYNNTLSYLRLGMDGNLRFYTYNPNVQGVAWELVYTFLDRNSIEGECQLPERCGKYGLCENSQCVACPTPNGLSGWSKDCEAKVTSCKASEFSYYKLEGVDHFMIKYTKGDGGRKQSDCESKCTKDCKCMGYFYHTQGSRCWIAYDLKTLTRVGNSTHLAYIKAPKK | 446 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03255 | 446 | Gene3D | - | 60 | 164 | IPR036426 | - | |
| Cien5g03255 | 446 | CDD | B-lectin | 48 | 165 | IPR001480 | - | |
| Cien5g03255 | 446 | ProSiteProfiles | Bulb-type lectin domain profile. | 32 | 163 | IPR001480 | - | |
| Cien5g03255 | 446 | Pfam | D-mannose binding lectin | 94 | 178 | IPR001480 | - | |
| Cien5g03255 | 446 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 60 | 444 | IPR051343 | - | |
| Cien5g03255 | 446 | Pfam | S-locus glycoprotein domain | 242 | 351 | IPR000858 | GO:0048544(InterPro) | |
| Cien5g03255 | 446 | PIRSF | SLG | 1 | 446 | IPR035446 | - | |
| Cien5g03255 | 446 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 210 | IPR036426 | - | |
| Cien5g03255 | 446 | SMART | blect-4 | 48 | 165 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03255 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:78001983 | Cien5g03260 | Cien-Chr5:78060765 | dispersed | |
| Cien | Cien-Chr5:78001983 | Cien5g03256 | Cien-Chr5:78008881 | tandem |