Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03256 | ATGGCTTCTCTCCATTCCATCTATACAACTTCCTTTCTGCTTTTGCTCAGCTTTCAGCTATTTTCCACCATTTCTGAAGCTGTTGTACCTGCTTCAGACACCTTCACTTACGTAAATGAAGGTGAATTTGGAGATTATATTGTTGAATACGATGCAAATTATCGTGCTCTCCCTCCATTCGCTAACCCATTCCAACTGTGTTTCTACAACACGACCCCCAACGCATTCACTCTAGCTCTACGTATGGGTACGGTCCGATCGGAGTCGCTCATGCGTTGGGTTTGGGAAGCTAACCGGGGGAACCCAGTTCGTGAGAACGCCACCCTGACCTTCGGTACAGATGGGAACCTTGTCCTGGCAGATGCCGATGGCCGGATTGCTTGGCAAACTAATACCGCCAACAAGGGCGTCGTCGGTTTTCAGGTGCTGCCTACCGGTAACATGGTTCTTCATGATGGGAAGGGTAATTTCATATGGCAAAGCTTCGATTCCCCAACGGACACTCTCTTGGTGGGTCAATCTCTCCGAGCTGGTGGTGCCAGTAAGCTGGTCAGTCGGGCTTCAGCCGTCAACAACATCGATGGACCGTATAGCTTGGTGATGGAGCCAAAACAGCTAGCCTTGTATTACAGGAGCGCCAACTCACCTCGCCCAATGCTTTATTGGTCCTCTATCGAATGGTTCACCATTGACAAGGGTAGTCTGGCTAATCTAACTCTTGCTTCAGTTCCAGATACCGATGCGGGTTTTCTTTATTACTTGTCGTTTAATTACTTTATGACAAACCCCTCCTCCAATTCGGATCGCTACATGGCCTACTCACGATACAACAACACGTTATCTTATCTTAGACTTGGAATAGATGGGAACCTTAGATTCTACACGTATAATCCAAACGTGCAAGGCGTTGCCTGGGAACTGGTATATACCTTTCTAGACCGGGATTCCATGGAAGGCGAGTGCCAATTACCTGAAAGATGCGGGAAGTTTGGGCTATGTGAGAATAGCCAGTGTGTTGCATGCCCGACACCAAACGGACTAAGTGGCTGGAGCAACGATTGTGACGCAAAGAAGGTGACATCTTGTAAAGCAAGTGACTTTGGGTACTACAAGCTTGAAGGTGTTGACCATTTTATGATTAAGTACACAAGGGGAGATGGAGGAAGTAAGCAAAGCGATTGTGAAAGCAAATGCACCAAGGACTGCAAGTGCATGGGGTATTTCTACCACACACAAGGGTCAAGGTGCTGGATTGCTTACGATTTGAAAACATTAACAAGAGTTGGAAACTCGACTCATCTGGCGTACGTTAAAGCACCCAAGTAG | 1326 | 47.29 | MASLHSIYTTSFLLLLSFQLFSTISEAVVPASDTFTYVNEGEFGDYIVEYDANYRALPPFANPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRIAWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQSLRAGGASKLVSRASAVNNIDGPYSLVMEPKQLALYYRSANSPRPMLYWSSIEWFTIDKGSLANLTLASVPDTDAGFLYYLSFNYFMTNPSSNSDRYMAYSRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPERCGKFGLCENSQCVACPTPNGLSGWSNDCDAKKVTSCKASDFGYYKLEGVDHFMIKYTRGDGGSKQSDCESKCTKDCKCMGYFYHTQGSRCWIAYDLKTLTRVGNSTHLAYVKAPK | 441 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03256 | 441 | Pfam | S-locus glycoprotein domain | 233 | 346 | IPR000858 | GO:0048544(InterPro) | |
| Cien5g03256 | 441 | CDD | PAN-AP-plant | 361 | 438 | - | - | |
| Cien5g03256 | 441 | CDD | B-lectin | 48 | 165 | IPR001480 | - | |
| Cien5g03256 | 441 | Gene3D | - | 44 | 163 | IPR036426 | - | |
| Cien5g03256 | 441 | ProSiteProfiles | Bulb-type lectin domain profile. | 32 | 163 | IPR001480 | - | |
| Cien5g03256 | 441 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 73 | 212 | IPR036426 | - | |
| Cien5g03256 | 441 | SMART | blect-4 | 48 | 165 | IPR001480 | - | |
| Cien5g03256 | 441 | PIRSF | SLG | 1 | 441 | IPR035446 | - | |
| Cien5g03256 | 441 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 61 | 439 | IPR051343 | - | |
| Cien5g03256 | 441 | Pfam | D-mannose binding lectin | 94 | 177 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03256 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:78008881 | Cien5g03260 | Cien-Chr5:78060765 | dispersed | |
| Cien | Cien-Chr5:78001983 | Cien5g03256 | Cien-Chr5:78008881 | tandem | |
| Cien | Cien-Chr5:78008881 | Cien5g03257 | Cien-Chr5:78025209 | tandem |