Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03257 | ATGTTGGATAATACAGTGGCTTCAAAACATTATCCAGTCTATATATACGAGCTCTTTCCTGCTCTCAAAACACCAACGAAAATGGCTTCTCCCCATTCCATCTATACAACTTCCTTTCTTCTTTTGCTCAGCTTTCAGCTATTTTCCACCATTTCTGAAGCTGTTGTACCTGCTTCAGACACCTTCACTTACGTAAACGAAGGTGATTTTGGAGAGTATATTGTCGAATACGATGCAAATTATCGTGCTCTCCCTCCATTCGCTAACCCATTCCAGTTGTGTTTCTACAACACGACCCCCAACGCATTCACTCTAGCTCTACGTATGGGTACGGTCCGATCGGAGTCGCTCATGCGTTGGGTTTGGGAAGCTAACCGGGGGAACCCAGTTCGTGAGAACGCCACCCTCACCTTCGGTACAGATGGAAACCTTGTCCTGGCGGATGCCGATGGCCGGATTGCCTGGCAAACTAATACCGCCAACAAGGGTGTTGTCGGTTTTCAGGTGCTGCCTACCGGTAACATGGTTCTTCATGATGGCAAGGGTAATTTCATATGGCAAAGCTTCAATTCCCCATCTGATACTCTCCTTGTCGGTCAAAGCCTCCGAGCTGGTGGTGCAAGTAAGCTGGTCAGTCGGGCTTCGGCCGAGAACAACATCGATGGACCGTATAGCTTGGTGATGGAGCCTAAACAGCTAGCCTTGTATTACAAGAGCGCCAACTCACCTCGCCCAATGCTTTATTGGTCCTCTATCGAATGGTTCACCATTGACACGGGTAGTCTGGATAATATAACTGTTACTTCATTTCCAGATACCGATGAGGGTTTTCTTTATTTCTCGACGTTTCTTTACTTTACGACAAACCCCTCCTACAATTCGAATCGCAACATTGCCTACTCACGATACAACAACACGTTATCTTATCTTAGACTTGGGATAGATGGGAACCTTAGATTCTACACGTATAATCCAAACGTGCAAGGCGTTGCCTGGGAACTGGTAGAAACGTTTCTCGACAGGGACTCCAGACTGGAAGGCGAGTGCCAATTACCTGAAAGATGCGGGAAGTTTGGGCTATGTGAGAATAGCCAGTGTGTTGCATGCCCGACACCAAACGGACTAAGTGGATGGAGCAAAGATTGTGACGCAAAGAAGGTGACATCTTGTAAAGCAAGTGACTTTGGGTACTACAAGCTTGAAGGTGTTGACCATTTTATGATTAAGTACACAAGGGGAGATGGAGGAAGTAAGCAAAGCGATTGTGAAAGCAAATGCACCAAGGACTGCAAGTGCATGGGGTATTTCTACCACACACAAGGGTCGAGGTGCTGGATTGCTTACGATTTGAAAACATTAACAAGAGTTGGAAACTCAAGTCATTTGGCGTACATCAAAACACCCAAGTAG | 1410 | 46.31 | MLDNTVASKHYPVYIYELFPALKTPTKMASPHSIYTTSFLLLLSFQLFSTISEAVVPASDTFTYVNEGDFGEYIVEYDANYRALPPFANPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRIAWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFNSPSDTLLVGQSLRAGGASKLVSRASAENNIDGPYSLVMEPKQLALYYKSANSPRPMLYWSSIEWFTIDTGSLDNITVTSFPDTDEGFLYFSTFLYFTTNPSYNSNRNIAYSRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVETFLDRDSRLEGECQLPERCGKFGLCENSQCVACPTPNGLSGWSKDCDAKKVTSCKASDFGYYKLEGVDHFMIKYTRGDGGSKQSDCESKCTKDCKCMGYFYHTQGSRCWIAYDLKTLTRVGNSSHLAYIKTPK | 469 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03257 | 469 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 88 | 468 | IPR051343 | - | |
| Cien5g03257 | 469 | SMART | blect-4 | 75 | 192 | IPR001480 | - | |
| Cien5g03257 | 469 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 100 | 237 | IPR036426 | - | |
| Cien5g03257 | 469 | CDD | PAN-AP-plant | 389 | 468 | - | - | |
| Cien5g03257 | 469 | PIRSF | SLG | 29 | 469 | IPR035446 | - | |
| Cien5g03257 | 469 | Gene3D | - | 67 | 191 | IPR036426 | - | |
| Cien5g03257 | 469 | CDD | B-lectin | 75 | 192 | IPR001480 | - | |
| Cien5g03257 | 469 | Pfam | D-mannose binding lectin | 121 | 204 | IPR001480 | - | |
| Cien5g03257 | 469 | ProSiteProfiles | Bulb-type lectin domain profile. | 59 | 190 | IPR001480 | - | |
| Cien5g03257 | 469 | Pfam | S-locus glycoprotein domain | 259 | 374 | IPR000858 | GO:0048544(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03257 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:77954650 | Cien5g03257 | Cien-Chr5:78025209 | dispersed | |
| Cien | Cien-Chr5:77962444 | Cien5g03257 | Cien-Chr5:78025209 | dispersed | |
| Cien | Cien-Chr5:78025209 | Cien5g03260 | Cien-Chr5:78060765 | proximal | |
| Cien | Cien-Chr5:78008881 | Cien5g03257 | Cien-Chr5:78025209 | tandem |