Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03267 | ATGCTTCTTTCTCGTATGAAGAGGCGATCTCTGCGATGGAGACGAACAGCCAGGAATTTAATCATCTTCTCTGTTCTCTTTGAGTTTGTTGCAATCGGTTATGCTATCATGACAACAAGAACAGTAAACATGGAATGGAGAATGCGATCATTACGAGTCTTACCAATGTTTCTTCTACCTGCTTTATCATTCGCTTTGCATTACGGACTTTTGAGCTTCACGAGATACGGTGATCGCAGGGATCAGAAGACATTAGAGAAACTTCGAGCTGAAAGACAAGCAAAAATTGATGAACTAAAAGAGAGAACCAATTACTACATTACTCAACAACTCATTCAGAAATACGATCCTGATCCAGCAGCAAAAGCAGCTGCTGCATCTGTTCTTGCATCAAAACTGGGTGCAGATTCAGGCCTGAAAGTGTTTCTTGGAGACGAATCACAACCAAATCCGTACGCAACATCGAAGAACAATGAAGTCGAGGTTCATCAAACTACTGGTCTCAGAAAACGAAATCAATCAACAAACCCTAGAAGTAATCCAGTCCAGCAATCTGAAAACGAAATTGGAGATGGAAGTTCTGAGAAATCTTCACATGGTGATATTGTGGTTCATCACCAAGATCCAGCAACTTTAGGTGGTCAAGACGGTGGTTGGATTGCTAGAATTGCTGCATTGCTTGTAGGAGAAGACCCAACACAATCTTATGCACTTATATGTGGGAATTGTCATATGCATAATGGACTTGCAAGAAAGGAGGAGTTTCCATTTATTACTTACTATTGTCCACATTGTCATGCATTAAATAAACCCAAAAATTCTGGGATTTCTTCTGAAACCATGTCCCCTGTTTTGGGACCTTCAAGAACAGCAAGTCAAGATGTTAAATTGATTGAAGAAAATAAGGAGTTGATGGGTGAAAAAGTACCGGATGACATCACCAGCCACGTGGCAGGTGAAGTGGAAGAGAAAGAAGAAAGTGAGAATTAG | 990 | 40.61 | MLLSRMKRRSLRWRRTARNLIIFSVLFEFVAIGYAIMTTRTVNMEWRMRSLRVLPMFLLPALSFALHYGLLSFTRYGDRRDQKTLEKLRAERQAKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLGDESQPNPYATSKNNEVEVHQTTGLRKRNQSTNPRSNPVQQSENEIGDGSSEKSSHGDIVVHHQDPATLGGQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEEFPFITYYCPHCHALNKPKNSGISSETMSPVLGPSRTASQDVKLIEENKELMGEKVPDDITSHVAGEVEEKEESEN | 329 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03267 | 329 | Coils | Coil | 82 | 102 | - | - | |
| Cien5g03267 | 329 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 3 | 291 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) | |
| Cien5g03267 | 329 | MobiDBLite | consensus disorder prediction | 146 | 200 | - | - | |
| Cien5g03267 | 329 | MobiDBLite | consensus disorder prediction | 148 | 191 | - | - | |
| Cien5g03267 | 329 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 219 | 269 | IPR019273 | - | |
| Cien5g03267 | 329 | MobiDBLite | consensus disorder prediction | 305 | 323 | - | - | |
| Cien5g03267 | 329 | MobiDBLite | consensus disorder prediction | 305 | 329 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03267 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 64376 | Cien1g02906 | Cien5g03267 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr1:79364256 | Cien5g03267 | Cien-Chr5:78212681 | wgd |