AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03277 | ATGGGTGCTTGCGGGTGGTTTAAAAGGTTAATCGGCTTGAAAAGAAAGAAGGAAGCTAAACCCAAGAAAATAGAGGATTCCAAGATTGCAATTGGCTCAAAGGGTCGGGATTCTTTTCGAGCCGGTAGTACAAAAGTAATTGGTCGAAGCACAGGAACAAAAGAATTTGCTGCTACTAGAATCCAAACTGCATATCGTGCTCATCGGGCAAGAAAAGCGCTACGTTGTTTAAAAGGGGCATCAAGATTTCAGTCATTGATCGAGCCCATTGCTCTTACAAAGCAATCTTTTTCCGCTCTTGACAAAATACATTTTTGGAGCAAAATACAAACGGAAATTAGAACGCGCCGCCATTGGATGGTGGCGGAAGGAAGAATAAAGCAGAAAAAGCTTGAAAATCAAGTCAAAATTGAGTCAAAGCTTCATGAACTTGAGGTTGAATGGTGTGGTGGGCCCGAGACGATGGATGAGATTGTGTCGAGAATACAACAACGAGAAGAAGCCACAAATAAACGGGAACGTGCAATGGCGTATGCCTTCTATCATCAATGGAGGGCGAACTCAAACCGATATTTTGGTCAAGCGTACTATGACCTAAGCAAAGAAAGTTGGGGATGGAGTTGGAAGGAGCGGTGGATTGCAGTGTGCCCGTGGGAGGCTCGGGTGATTGCACGGGCTAAGCAACAAAACAAGCCCGTTAAAACAACGAAACATGGTGCGCCAAAAATAATTGTTGCGGTTAAATCGCAAACGGGTAGTGGAAAAGGTACAATCAAAGCAACACATGGTACTACTTGA | 798 | 44.11 | MGACGWFKRLIGLKRKKEAKPKKIEDSKIAIGSKGRDSFRAGSTKVIGRSTGTKEFAATRIQTAYRAHRARKALRCLKGASRFQSLIEPIALTKQSFSALDKIHFWSKIQTEIRTRRHWMVAEGRIKQKKLENQVKIESKLHELEVEWCGGPETMDEIVSRIQQREEATNKRERAMAYAFYHQWRANSNRYFGQAYYDLSKESWGWSWKERWIAVCPWEARVIARAKQQNKPVKTTKHGAPKIIVAVKSQTGSGKGTIKATHGTT | 265 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03277 | 265 | ProSiteProfiles | IQ motif profile. | 54 | 82 | - | - | |
| Cien5g03277 | 265 | PANTHER | IQ-DOMAIN 5-RELATED | 48 | 230 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03277 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 66541 | Cien5g03277 | Cien9g02287 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr5:78364527 | Cien7g02975 | Cien-Chr7:74208341 | dispersed | |
| Cien | Cien-Chr4:3378523 | Cien5g03277 | Cien-Chr5:78364527 | transposed | |
| Cien | Cien-Chr5:78364527 | Cien8g01132 | Cien-Chr8:18253597 | wgd | |
| Cien | Cien-Chr5:78364527 | Cien9g02287 | Cien-Chr9:46042880 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cien9g00002 | . | 11 | 534 | IQD Protein family | AT4G00820 | 53.309 | 1.18e-150 | 441.0 | |
| Cien9g02287 | ACH | 104 | 225 | IQD Protein family | AT3G15050 | 50.0 | 1.25e-35 | 127.0 | |
| Cien8g00399 | . | 43 | 98 | IQD Protein family | AT2G26180 | 65.625 | 3.69e-20 | 80.5 | |
| Cien8g00527 | . | 1 | 437 | IQD Protein family | AT5G13460 | 45.227 | 1.23e-101 | 306.0 | |
| Cien8g01132 | . | 1 | 254 | IQD Protein family | AT3G15050 | 45.038 | 1.44e-59 | 189.0 | |
| Cien8g02155 | . | 1 | 374 | IQD Protein family | AT4G14750 | 32.481 | 9.95e-40 | 143.0 | |
| Cien8g02333 | . | 1 | 100 | IQD Protein family | AT3G51380 | 52.632 | 2.70e-30 | 103.0 | |
| Cien8g03201 | ACH | 99 | 179 | IQD Protein family | AT1G74690 | 55.556 | 3.15e-21 | 92.8 | |
| Cien8g03204 | ACH | 1 | 234 | IQD Protein family | AT1G14380 | 44.444 | 2.86e-49 | 175.0 | |
| Cien7g00491 | . | 11 | 534 | IQD Protein family | AT4G00820 | 45.179 | 2.06e-119 | 361.0 | |
| Cien7g02327 | ACH | 507 | 585 | IQD Protein family | AT2G02790 | 48.101 | 1.77e-12 | 65.9 | |
| Cien7g02975 | . | 84 | 392 | IQD Protein family | AT3G22190 | 59.295 | 5.70e-97 | 290.0 | |
| Cien5g02128 | ACH | 1 | 267 | IQD Protein family | AT5G03040 | 34.752 | 2.04e-37 | 137.0 | |
| Cien5g02265 | . | 348 | 481 | IQD Protein family | AT4G23060 | 40.972 | 1.35e-15 | 72.4 | |
| Cien5g03109 | . | 1 | 400 | IQD Protein family | AT5G35670 | 42.067 | 7.36e-76 | 239.0 | |
| Cien5g03148 | . | 180 | 261 | IQD Protein family | AT1G19870 | 39.024 | 4.78e-07 | 46.6 | |
| Cien5g03277 | ACH | 1 | 240 | IQD Protein family | AT3G15050 | 51.012 | 2.65e-76 | 231.0 | |
| Cien4g00154 | . | 99 | 261 | IQD Protein family | AT2G33990 | 40.341 | 3.24e-33 | 119.0 | |
| Cien4g00768 | . | 1 | 444 | IQD Protein family | AT3G49260 | 48.472 | 2.66e-101 | 308.0 | |
| Cien4g01178 | . | 183 | 517 | IQD Protein family | AT3G59690 | 52.52 | 1.48e-110 | 331.0 | |
| Cien4g01827 | ACH | 1 | 455 | IQD Protein family | AT5G03040 | 50.98 | 1.60e-129 | 381.0 | |
| Cien4g02878 | . | 27 | 123 | IQD Protein family | AT5G35670 | 40.206 | 6.51e-08 | 49.7 | |
| Cien3g00102 | . | 1 | 374 | IQD Protein family | AT4G14750 | 49.749 | 1.45e-95 | 288.0 | |
| Cien3g00670 | . | 1 | 288 | IQD Protein family | AT4G14750 | 29.114 | 5.83e-15 | 72.8 | |
| Cien3g00775 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 47.439 | 4.15e-63 | 205.0 | |
| Cien3g03535 | ACH | 107 | 381 | IQD Protein family | AT5G03040 | 51.246 | 2.66e-78 | 251.0 | |
| Cien3g03909 | ACH | 82 | 342 | IQD Protein family | AT5G07240 | 39.55 | 4.45e-39 | 141.0 | |
| Cien2g01502 | . | 11 | 534 | IQD Protein family | AT4G00820 | 35.912 | 4.26e-75 | 244.0 | |
| Cien2g01588 | ACH | 7 | 339 | IQD Protein family | AT5G62070 | 40.805 | 5.94e-40 | 143.0 | |
| Cien2g02175 | ACH | 1 | 421 | IQD Protein family | AT3G52290 | 52.079 | 7.11e-120 | 354.0 | |
| Cien2g02321 | ACH | 38 | 448 | IQD Protein family | AT5G03040 | 54.916 | 1.04e-133 | 394.0 | |
| Cien2g02920 | ACH | 1 | 575 | IQD Protein family | AT1G74690 | 39.898 | 1.67e-82 | 266.0 | |
| Cien2g03481 | . | 1 | 414 | IQD Protein family | AT1G72670 | 42.597 | 2.96e-87 | 269.0 | |
| Cien2g03596 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 51.244 | 7.26e-95 | 287.0 | |
| Cien1g00088 | . | 1 | 409 | IQD Protein family | AT2G26180 | 60.722 | 3.10e-145 | 419.0 | |
| Cien1g00227 | . | 1 | 481 | IQD Protein family | AT4G23060 | 41.247 | 1.88e-69 | 226.0 | |
| Cien1g00686 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 46.943 | 1.17e-110 | 332.0 | |
| Cien1g02348 | ACH | 1 | 341 | IQD Protein family | AT3G16490 | 41.828 | 8.83e-48 | 164.0 | |
| Cien1g02694 | . | 1 | 353 | IQD Protein family | AT3G16490 | 51.768 | 3.84e-88 | 270.0 |