AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03293 ATGGGGTGGACATGGAAGGAAGCACACTTAGACTTATTCCTGGTGCCATTAGGGTTATTGATCATGTGTGCCTATCATCTATTCCTTCTTTACAGATACCACATCATCCCTGAAACTACAACAATCGGCTTTGAGAACCATAATAAAAGTGCATGGGTTGAGAAGATGCTGCAGATTGAAGCTAGAGATAGAGGGTTTGCTGTATCGGTCCTTACCAGTCACTTAAACGCAGCAATCTCTCTTGCTTCAATTTCTTTAGCTCTATGCTCTCTTATCGGAGCTCTACTTGGAGGTTCTTCCACAAACTTCTTCACAAGTCATTTTGTCTATGGGGACAAAAGCCACACCACAAGCTACATAAAGTACATTTCCATGATAACTTGCTTCTTATTAGCATTTGCATGTTTTGTACAAACTACAAGGCACTTTGTACATGCAAGTTTCCTCATTAGCATGCCCAAAGGTGATGTTCCGGTGAAGTACATCCAAAAGGCGTTGGTAAGAGGAAGCATCTTCTGGCTTGTTGGATTGCGTGTGCTCTACTTTGCAGGCACCTTGATATTATGGATATTTGGTCCAATTCCAATGCTTGTTTCTTCAGTAGGTTTAGTGGTACTTTGTCATTTTCTAGATACTAATAATGATGAAATGATTCAGTATCAGTCGAAACAGAATGGTGGAGGTGGTAATTTTCTGAGGAATATCGAGCATAATATAAGTGCAAGGGTTGGGGCTTTTGAGCATAATAGAAGGTCACACATGGAAGAAACAAACTCGCTACAGCCTCAAGATATCATGTAA 801 40.57 MGWTWKEAHLDLFLVPLGLLIMCAYHLFLLYRYHIIPETTTIGFENHNKSAWVEKMLQIEARDRGFAVSVLTSHLNAAISLASISLALCSLIGALLGGSSTNFFTSHFVYGDKSHTTSYIKYISMITCFLLAFACFVQTTRHFVHASFLISMPKGDVPVKYIQKALVRGSIFWLVGLRVLYFAGTLILWIFGPIPMLVSSVGLVVLCHFLDTNNDEMIQYQSKQNGGGGNFLRNIEHNISARVGAFEHNRRSHMEETNSLQPQDIM 266
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03293 266 PANTHER OS02G0292800 PROTEIN 4 225 - -
Cien5g03293 266 Pfam Protein of unknown function, DUF599 14 214 IPR006747 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03293 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
66547 Cien5g03293 Cien9g02280
66548 Cien5g03293 Cien9g02282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr5:78617352 Cien9g02281 Cien-Chr9:45920379 dispersed
Cien Cien-Chr6:4061275 Cien5g03293 Cien-Chr5:78617352 transposed
Cien Cien-Chr5:78617352 Cien8g01153 Cien-Chr8:18497440 wgd