AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03305 ATGTCAATGCTGTTGGGTTCTTTTCGTAGTCATTTCTTCAAACAGTTGTCGTGCACTTCATGCTCGTCGATTCGTAGCACATCAAGTCTCACCCCTGGATCCAGTTTTATGTTATTTGGCTCCACCAAAGATTACCCATCAAGAAAGTTGTTAGATTTCTTGAAATTCAGTCCAGTTACAGCAGCATTCTCCACATCTTCTTCCGATTCTGAAACTCCGACAACTGGTTCGTACCTATCTGTGGACATACAATGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCTCTTTTATGTTTTGGTGCTACTTCCACAACCATGGTTGAACCAGACACCTGCAACTCAAATGACGAGGTCTCCATTGGTTCGATCTTCTTGGTATCTCATGACGTCCATCAAAGTATCGCACTGGCAGCAAATTCAATAGGCCTGAAAGAAACACCAGTTTACAAAGTCACAACGGGTTACCAATCTGACTGGATCGAGAATTCTCGAGAATCTTTCCATCCAATTGAAGTCACAGAAGGACTTTGGATTGTACCCGAGTGGATAACACCCCCAAATCTTCAAGCAACAATTATAACTCTAAACCCCGGTTTAGCATTTGGAACAGGAGACCACCCGACTACCAAATTATGTCTCTTACAATTACACGGTTTAATCAAAGGTGGAGAAACGGTTCTTGATTATGGCACAGGTTCCGGGATTCTTGCAATTGCGGCACTAAAGTTCGGTGCAGCCAAATCAGTTGGGTTTGATATAGATCCTCAAGCGATAACAGCCGCACGTTATAATGCGAGTCTGAACAACATAGGACCTGAGAAATTGGAATTGCGGCTTGTTCCTAGTGATCCTAGGAACACGAGTTCTTCATCGAGAGATGAATGGAATTGGGCTATGAAAGGTAACAGTGTCGAAGAGAAGGATTTAGCGGAAGTGAGAGAAACGTACGATGTTGTTATTGGGAACATTCTTTTGAATCCTTTGTTAGATTTGGCGGATGAGATTGTTTCTTATGCGAAGCCTGGTGGTGTAGTTGGTCTTTCTGGTATTATCTTGGAGCAGGTACCGACTGTTGTAGCTCGATACTCGAATCTTCTGGAAGGTATGATTGTCTCAGAGATTGATGACTGGGCATGCATACGTGGCACAAAGAAGAAGGCTTACGTGGGGTAG 1176 43.54 MSMLLGSFRSHFFKQLSCTSCSSIRSTSSLTPGSSFMLFGSTKDYPSRKLLDFLKFSPVTAAFSTSSSDSETPTTGSYLSVDIQCRQDVADMLSEALLCFGATSTTMVEPDTCNSNDEVSIGSIFLVSHDVHQSIALAANSIGLKETPVYKVTTGYQSDWIENSRESFHPIEVTEGLWIVPEWITPPNLQATIITLNPGLAFGTGDHPTTKLCLLQLHGLIKGGETVLDYGTGSGILAIAALKFGAAKSVGFDIDPQAITAARYNASLNNIGPEKLELRLVPSDPRNTSSSSRDEWNWAMKGNSVEEKDLAEVRETYDVVIGNILLNPLLDLADEIVSYAKPGGVVGLSGIILEQVPTVVARYSNLLEGMIVSEIDDWACIRGTKKKAYVG 391
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03305 391 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 365 IPR029063 -
Cien5g03305 391 CDD AdoMet-MTases 226 346 - -
Cien5g03305 391 Gene3D Vaccinia Virus protein VP39 167 390 IPR029063 -
Cien5g03305 391 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 78 386 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Cien5g03305 391 Pfam Ribosomal protein L11 methyltransferase (PrmA) 78 386 - -
Cien5g03305 391 Hamap Ribosomal protein L11 methyltransferase [prmA]. 76 385 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03305 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]