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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03320 ATGGCTACCAACATTAGGGTTGTGATCATCATGTTAGCAATCAGTTTCCCACGTTTTACAACATCGAAACCCATGATCTTGTCGTCCCAACCACAATGGACAGTATTAAACCGGTTGTCAGGCAGTCCACGGCGGCTTGTAGGTGACACGATTGACATGAGGGAAGAAATGATGATGGAATCCGAAAGTGCTAGAAGAATCCTAGCTGGAAGAGGCTACATTAGCTATAACGCAATGCAAAAGAACAACGTCCCATGCAACCAACGTGGTCAATCTTATTATGATTGTAATAGTAGAGGTCAGGCTAATCCGTATTCTCGAGGTTGCAACGTTATCACCAGGTCGCATCAATTCCATTTATTTTGCCCAATAATGCCCCACATCCGAGGCTTTGTGCCTAAATATCACGCAGCCTCTTGTCACGCTTCCTGTGTAAAAGAGCAGAGTAGACCAACCAGCCATAACTGTCGATGGCGGCGAATGGCGTGA 489 45.81 MATNIRVVIIMLAISFPRFTTSKPMILSSQPQWTVLNRLSGSPRRLVGDTIDMREEMMMESESARRILAGRGYISYNAMQKNNVPCNQRGQSYYDCNSRGQANPYSRGCNVITRSHQFHLFCPIMPHIRGFVPKYHAASCHASCVKEQSRPTSHNCRWRRMA 162
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03320 162 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 32 115 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Cien5g03320 162 Pfam Rapid ALkalinization Factor (RALF) 55 114 IPR008801 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03320 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
66549 Cien5g03320 Cien9g02265
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr1:33434333 Cien5g03320 Cien-Chr5:78872034 dispersed
Cien Cien-Chr5:78872034 Cien9g02265 Cien-Chr9:45596695 wgd