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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cien5g03334	ATGGTATTGAGCATTACTTGTTGCACATCATGGTGTGAACGTCTTGGACTTGTCCAAGATATCGAAACCAGAAGAAGCCCACCATTTGGACCGCCAACAACCACCCACCACCATGTTGTGACGACGTCAGGGGCCCGGCATAATGGTGATCTTGGTGAAATCGTGAAGGAACAAATATTCGATAGTAGTACATGCAAGAACAATGAGTGTATGATATGCATCGAGGAGTTTAAAGAGAAGGAGACGACACCAGGTTTATTTTGGGACAAAAAGGATGGTAAGGTGATATGTGAACCGCCACAAATAAACAAACTTATTATATACACTTTTATAGACACACGGTGGCACAAATCAGCCATGAGTTGGATGATCTCCAGGTGGACTTGCGCTGGATCTTCTCGTCCGGAAATTGGGATGTCGACCAAATCATGGGTTTTGCACGGCGTTGCCGTTGCCGCTGCTCTCGTCGGTGCTCACGCTTACTTTTATTACCGCCGATCTGCTACCATGTTTCGGAGTCGAGTGGTGGGCATAATTCCAGCCCGGTTCGCTTCTTCCCGATTTCAGGGCAAACCCCTCGTTGAGATCCTCGGCAAACCCATGATACAGAGAACTTGGGAAAGAGCAAAGTTGGCAACAACATTGGATCGTGTTATTGTGGCAACGGACGATGAAAAGATTGCAGAGTGTTGTCGTGGATTTGGTGCTGACGTGATAATGACTGCAGAATCGTGCAGAAACGGCGCCGAGAGGTGTAGTGAAGCACTTCAAAAGCTCGACAAAAAGTACGACATCGTTGTCAATATTCAAGGAGACGAACCGCTAATCGAACCTGAAATTATCGATGGAATCGTCAAAGCCCTTCAGACCACCCCAGATGCAGTTTTCAGTACGGCAGTCACATCTTTGAAACCAGAAGATGCTTTTGATCCAAATCGTGTGAAATGTGTGGTTGATAACCGTGGTTATGCAATCTACTTTTCTCGAGGACTAATCCCTTTTAACAAGTCTGGCAAGACAAATCCTGAATTCCCATATAATCTTCATCTTGGCATTCAGAGCTATGATTCGGAATTTTTAAAGATTTATCCGGATTTAACTCCAACTCCATTGCAACTAGAAGAAGATTTGGAACAACTTAAAGTTCTTGAAAATGGGTACAAGATGAAGGTAATAAAAGTGGATCATGATGCTCATGGTGTGGATACTCCAGAAGATGTGGCCAAGATTGAAAATTTTATGCGCGAAAGGAATTTGTCTTAG	1263	44.26	MVLSITCCTSWCERLGLVQDIETRRSPPFGPPTTTHHHVVTTSGARHNGDLGEIVKEQIFDSSTCKNNECMICIEEFKEKETTPGLFWDKKDGKVICEPPQINKLIIYTFIDTRWHKSAMSWMISRWTCAGSSRPEIGMSTKSWVLHGVAVAAALVGAHAYFYYRRSATMFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERAKLATTLDRVIVATDDEKIAECCRGFGADVIMTAESCRNGAERCSEALQKLDKKYDIVVNIQGDEPLIEPEIIDGIVKALQTTPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKTNPEFPYNLHLGIQSYDSEFLKIYPDLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIENFMRERNLS	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cien5g03334	420	FunFam	3-deoxy-manno-octulosonate cytidylyltransferase	173	415	-	-
	Cien5g03334	420	CDD	CMP-KDO-Synthetase	174	411	IPR004528	GO:0008690(InterPro)
	Cien5g03334	420	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	165	415	IPR029044	-
	Cien5g03334	420	NCBIfam	3-deoxy-manno-octulosonate cytidylyltransferase	177	407	IPR004528	GO:0008690(InterPro)
	Cien5g03334	420	Hamap	8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB].	173	415	IPR004528	GO:0008690(InterPro)
	Cien5g03334	420	Pfam	Cytidylyltransferase	176	388	IPR003329	-
	Cien5g03334	420	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	175	417	IPR029044	-
	Cien5g03334	420	PANTHER	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	136	419	-	GO:0005829(PANTHER)\|GO:0008690(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cien5g03334	K00979	3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cien	Cien-Chr3:79618336	Cien5g03334	Cien-Chr5:78986914	dispersed
	Cien	Cien-Chr5:78986914	Cien9g00442	Cien-Chr9:7317006	dispersed
	Cien	Cien-Chr5:78986914	Cien5g03335	Cien-Chr5:78995969	tandem