Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03386 | ATGCAACCCCAGAAAACCCTACCGGAATCTGACTTACCATCGCTCGCCGCCATCAAAGTCAAGTCGTCATCCCCTCGTTTCCGTCCTACGAATCCTTCTGCCACCGAAACCCCCACCGCCGGCGCGCAGCGCAAGATAGGCATCGCCGTCGATCTTAGTGACGAGAGCGCCTTTGCTGTGAAGTGGGCTGTCCACCAGTATCTCCGCCCCGGTGACGCCGTGATCCTCATCCACGTCCGTCCTACTTCCGTCCTTTACGGCGCTGATTGGGGCTCTGTTGATCTTTCCATCGTCGACACCGACAATGAGGAATCACAGCGGAAGCTCGAAGATGATTTCGATGCTTTCACCACTACGAAATCCGCTGCCCTAGCGCAACCTCTAGTCGACGCGCACATACCGTACAAGATCCATATCGTCAAAGACCACGATATGAAGGAGAGGCTGTGTTTGGAAGTCGAGAGGCTAGGGTTATGTGCTGTTATCATGGGAAGCCGAGGATTCGGTGCTACGAAACGCGGAAGCGATGGAAGGCTCGGGAGTGTTAGCGATTACTGCGTGCGCCACTGTGTATGCCCCGTGGTAGTTGTGAGATATCCCGATGAGAAAGATCCCTCTGCCACTGAGCCGATTGTTTCGGTGGCAAGAGCCGACGATGAAGAAGACGATCCTGAATTCCATGATGCAACCGATGAACGAAAATCTCGTGAATTAGAATCTAAACGTAGATGGATTGGTCTCTGTTTGAATCTTTCATTTAGAGGATGA | 768 | 52.86 | MQPQKTLPESDLPSLAAIKVKSSSPRFRPTNPSATETPTAGAQRKIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDNEESQRKLEDDFDAFTTTKSAALAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLCAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDPSATEPIVSVARADDEEDDPEFHDATDERKSRELESKRRWIGLCLNLSFRG | 255 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03386 | 255 | CDD | USP-Like | 45 | 197 | - | - | |
| Cien5g03386 | 255 | Pfam | Universal stress protein family | 44 | 198 | IPR006016 | - | |
| Cien5g03386 | 255 | PANTHER | OS01G0783500 PROTEIN | 8 | 234 | IPR044162 | - | |
| Cien5g03386 | 255 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
| Cien5g03386 | 255 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 44 | 202 | - | - | |
| Cien5g03386 | 255 | PRINTS | Universal stress protein signature | 176 | 198 | IPR006015 | - | |
| Cien5g03386 | 255 | PRINTS | Universal stress protein signature | 43 | 61 | IPR006015 | - | |
| Cien5g03386 | 255 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cien5g03386 | 255 | Gene3D | HUPs | 33 | 210 | IPR014729 | - | |
| Cien5g03386 | 255 | MobiDBLite | consensus disorder prediction | 203 | 239 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03386 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cien | Cien-Chr3:32506877 | Cien5g03386 | Cien-Chr5:79734839 | dispersed | |
| Cien | Cien-Chr5:73259843 | Cien5g03386 | Cien-Chr5:79734839 | dispersed | |
| Cien | Cien-Chr5:79734839 | Cien7g00077 | Cien-Chr7:889475 | dispersed | |
| Cien | Cien-Chr5:79734839 | Cien8g01602 | Cien-Chr8:24925951 | transposed |