AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03424 ATGTTACTTAACTTGGGCTCCAATAAACTGGATTTGGACTTCGATAAATCTACTTGGGCTTATCCGACGTCGTCACACAAGCGCAACGATTTATCTCATGCTGTCAATGGTTTAAGGATGCGGATGAAAAACAGAAACAAAAGCTCACTAGTATTACCTCAGAAAATCTCTCCTGACTCCATTCCTCAACAGCCAAATTCTTATGAAGGTGAAAGTCTCTTCCATCTTCTCAACTCAATTCAAAGAGAAATCAAGTTAGCTAGGCTTTCAGATGAATCTCTACCTCATAAAATTTGGCTCAAGCAACAATTTTCAATTGGTGTCAATGATGTGACCCGTGTTCTTGAAAGGATGTCACCACTTCATGGATCTTTAAGCTCTCTCACACAAAATGTTAATGTTAAAGAGTCTCAAGTCCAATTACAGGTCATACTTATAGCAACGGATTGCAATCCTCGGTCGCTTACAAAGCACCTGCCGGTTCTGGCATCTTCTAGGGGCGTTTCGGTCATTTTCGTGAAAGATAAGAAAGGGGGCTCTTGTAAATTAGGTGAAATTGTTAATCTTAAAACGGCTATGGCAATTGGAGTCAAGGCTAGAGGAAATGCAATCAATAAACTTATAGACGATATTATTGGAGATAACGAGGTAAATAACGGTAATGTGGGGCCATGA 675 39.85 MLLNLGSNKLDLDFDKSTWAYPTSSHKRNDLSHAVNGLRMRMKNRNKSSLVLPQKISPDSIPQQPNSYEGESLFHLLNSIQREIKLARLSDESLPHKIWLKQQFSIGVNDVTRVLERMSPLHGSLSSLTQNVNVKESQVQLQVILIATDCNPRSLTKHLPVLASSRGVSVIFVKDKKGGSCKLGEIVNLKTAMAIGVKARGNAINKLIDDIIGDNEVNNGNVGP 224
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03424 224 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 140 199 IPR004038 -
Cien5g03424 224 Gene3D - 79 213 IPR029064 -
Cien5g03424 224 PANTHER OS07G0636400 PROTEIN 40 217 - -
Cien5g03424 224 SUPERFAMILY L30e-like 96 211 IPR029064 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03424 - -