AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03437 ATGGACGCCCTAGGTTCTGCTGTAGTTGACGGTGCTAAATCAATTTTTAAGTTAACCCTTTCAGGAATCAAGACACTTTCCAGATACGAAGAAAACATCTGCGACCTCCAGGGTGAGATTTCAATCCTCAAGAACAAAAAGATGTTGATCGAAGAAGACATGATCTTAGCCAAACTAGAAGGAAAAACTCCAAAACAGCAAGTAAACGAATGGTTAAGGAAGGTTTCTCGAGCTGAAGATGCTGTAAGGCCACTGCTGGAGATTCCTGAAGGAAACGCTGATACCGGATGCTTCAAGATGCTGCGCCAGTACCAACAGTGCTGGAAGGTGGCAAAGAAACTCGAACAGGTGAAAGAGCTCAACTCTACTAATTTTGAAATCATCGCCCCTGAACGATGCTCTCCTATAAAAGCTATGGAGGAAATGTCAGTCCCATCTCTTGTCGGGTTGCAGGCAGCTTCAGATATGAAGAAGCTTCTGGAAATCTTGAACAGTGATGACATCAGAAGGATTGCTGTCTGGGGGAAAGAGATTCCAGAAGATTTAGGAAGTTTATCTCATTTGAGAGAATTAAACCTTTCGTGCACGCGCTTGCTAAAGAAAATCGTTGCTGGCAGCATATCGGGGCTTTCAAGTCTCGAGACTTTAGATATGTCTTTTAGTGCTTATGATTGGAACCCAAAAATGGGTTTTGATCAAAAAGCAACATTTGATGAGTTGTCATCATTGGGCCACCTCTCAGTTGTAAAGATAAGGCTCGACTGCATTGACTGTCTGGCATATGCATCTCCATGGATCAAGAAGTTAAAAAAGTTTGATATCCAACTTAGTCCGAGGAACTGTGACTCAAATTGTAATACCCAATGCAATGAGAAAAGATTGGTTCTCAGAGGAGTTGATTTACTTCAAGAAAATCTTCAAGGTGTTCTACACAACACAAATTCCCTCAGCATGCTAACTTGTCAAGGCATGGCCCAGAGACATTGGCTTAGCTTATCGTCCCTGATATCACTCACTATATCAAATTGTAATGGTATAAGAATTTTGATGAGTCAGGAAAGAAGTTCAGAGGCAATGTTTCCAACTCTACAGCACTTGGTTCTCGAACATCTAAATAATTTAGAGACTATTGTTGAAGGGATACACCCTAGAGACATTTGCCTTAGCAATCTGAAGACAATTCAAGTTTTAGATTGTCCAAAGTTAAAAGGAACCATATCTTATGCAATGCTTCGTCATGTTAAAAAACTTGAAGAAATTAAGGTGAGTGGTTGTAAAAATATGTGTCGCATTATCGAATCAGGGGGGCATAAGAAGAAAACTCTTCCGGTTTTGAGAGTGATAGAGATAAGGAACATGGTGAAATTGAGGATAATATGTGATGGTACATCAGTTTGTCCATTGTTGCAGCAGATTGAAGTTTCTCGTTGCTCTGAGTTGAAGAAACTTCCTATTTCGGTTGCAAATTCGTGTAGCTTAAAAGAGATTAGAGGTGATATCAACTGGTGGAACAATTTAGTATGGGAGAATCATGATGATAAAAGCTTCTTTCTGCAACACTTTCAAGCGTACCCTTAG 1578 40.24 MDALGSAVVDGAKSIFKLTLSGIKTLSRYEENICDLQGEISILKNKKMLIEEDMILAKLEGKTPKQQVNEWLRKVSRAEDAVRPLLEIPEGNADTGCFKMLRQYQQCWKVAKKLEQVKELNSTNFEIIAPERCSPIKAMEEMSVPSLVGLQAASDMKKLLEILNSDDIRRIAVWGKEIPEDLGSLSHLRELNLSCTRLLKKIVAGSISGLSSLETLDMSFSAYDWNPKMGFDQKATFDELSSLGHLSVVKIRLDCIDCLAYASPWIKKLKKFDIQLSPRNCDSNCNTQCNEKRLVLRGVDLLQENLQGVLHNTNSLSMLTCQGMAQRHWLSLSSLISLTISNCNGIRILMSQERSSEAMFPTLQHLVLEHLNNLETIVEGIHPRDICLSNLKTIQVLDCPKLKGTISYAMLRHVKKLEEIKVSGCKNMCRIIESGGHKKKTLPVLRVIEIRNMVKLRIICDGTSVCPLLQQIEVSRCSELKKLPISVANSCSLKEIRGDINWWNNLVWENHDDKSFFLQHFQAYP 525
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03437 525 SUPERFAMILY L domain-like 161 494 - -
Cien5g03437 525 Gene3D Ribonuclease Inhibitor 162 303 IPR032675 -
Cien5g03437 525 Gene3D Ribonuclease Inhibitor 352 522 IPR032675 -
Cien5g03437 525 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 23 175 IPR050905 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03437 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1703006 Cien Cien5g03436 Cien-Chr5:80415565 Cien5g03437 Cien-Chr5:80431305