Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cien5g03452 | ATGTCTGCCACACCGTATGATCTCGGATCATTCACCTTTAGTCCGATCAAGGAAGCAATCGTGTCTCGTGAAATGACGAGGAGGTACATGACTGATATGATTACCTACGCCGATACCGACGTCGTTGTAGTCGGTGCTGGCTCCGCTGGTCTCTCCTGCGCTTACGAGCTTAGCAAAAACCCTAACGTTCAGGTCGCCATCATTGAGCAATCTGTAAGCCCCGGCGGTGGAGCATGGCTCGGAGGCCAACTCTTCTCCGCCATGGTAGTCCGCAAGCCCGCCCACCTCTTCCTCGACGAGCTTGAAATCGAGTATGACGAGCAAGAAGACTACGTAGTCATCAAGCACGCCGCCCTGTTCACCTCCACGATCATGAGCAAGCTCTTAGCCAGGCCAAACGTGAAGCTCTTCAACGCAGTAGCAGCAGAGGACTTAATCATCAAGGGAGGTAGAGTCGGTGGTGTTGTAACCAACTGGGCTTTAGTCGCAATGAACCACGACACACAGTCATGCATGGACCCCAATGTGATGGAGGCGAAAGTGGTTGTTAGCTCATGTGGACACGATGGTCCCATGGGTGCCACCGGAGTCAAACGTCTAAGGAGCGTCGGAATGATTGAGAGTGTTCCGGGGATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCGATTGTGAGGTTGACTAGAGAGATTGTTCCTGGTATGATCGTTACAGGAATGGAAGTTGCAGAGATCGATGGATCTCCAAGAATGGGGCCGACTTTTGGGGCTATGATGATATCTGGACAGAAGGCGGCTCATTTGGCTTTGAAGGCGTTGGGGTTGCCGAATGCTTTGGACGGGACAAGTGTGGGAAGTGTTCAGCCGGAGATGATTCTTGCAGCGGTTGATTCCGGTGAGACCGTGGATGCCTAA | 915 | 52.57 | MSATPYDLGSFTFSPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWALVAMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNAAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTSVGSVQPEMILAAVDSGETVDA | 304 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cien5g03452 | 304 | PRINTS | Adrenodoxin reductase family signature | 40 | 62 | - | - | |
| Cien5g03452 | 304 | PRINTS | Adrenodoxin reductase family signature | 208 | 221 | - | - | |
| Cien5g03452 | 304 | PRINTS | Adrenodoxin reductase family signature | 64 | 77 | - | - | |
| Cien5g03452 | 304 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 18 | 273 | IPR002922 | - | |
| Cien5g03452 | 304 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 2 | 303 | - | - | |
| Cien5g03452 | 304 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 1 | 282 | IPR027495 | GO:0009228(InterPro) | |
| Cien5g03452 | 304 | Pfam | Thi4 family | 22 | 255 | - | - | |
| Cien5g03452 | 304 | FunFam | Thiamine thiazole synthase, chloroplastic | 38 | 273 | - | - | |
| Cien5g03452 | 304 | SUPERFAMILY | FAD-NAD(P)-binding domain | 9 | 266 | IPR036188 | - | |
| Cien5g03452 | 304 | Gene3D | - | 38 | 273 | IPR036188 | - | |
| Cien5g03452 | 304 | Gene3D | - | 7 | 37 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cien5g03452 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 66570 | Cien5g03452 | Cien6g00068 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1714641 | Cien | Cien5g03452 | Cien-Chr5:80601186 | Cien6g00068 | Cien-Chr6:846705 |