AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03487 ATGGCGCCCCCTTCTCCTTCATCCACGTTTACCTGCAAAAACCAGTTCGCGATAACCCTAATCTGCATCTTCATCGTTACTTGTACCCACAGTCCCCGAGTACAAGCCCTTAAAGCACCAATCAGACCACAAGACATACTCCCACTTTTGCCCCGCCAAGTTTCATGGCCTCTTCTCAACACTTTTCGAGGCGCCGCCGATCTTATGCCAAGCTTCGTCGGGGCAGCGCCTATTGCAAATAACTCGTTGTTGAATTGGAAAGGGTCTTGCTTTTATGAGAATACTGCGTGGTTAGAGCTTCATAACAAAAGTGGTAGTGAATTTGGTGGAGGCACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTACGTGTTTGCCACTCCATATCGTGTGACATGGGACTACTATTTCATATCTCGTGAACATACACTCGAGTTTGATGAATGGAGTGGAAAAGCCGAGTATGAATATGTAAAACGTAAAGGAATTGCAATTTTCCTGATGGAAGCCGGGATGATAGGAACCCTACAAGCCTTATGGGAAGTTTTCCCCCTTTTTACAAATACGGGTTGGGGTGAAAGTTCAAATCTTGCTTTTCTTAAAAAACATATGGGAGCTAAATTTGAAGAACGACCCGGCCCATTTGTAACAAACATTACGGTTGATGATATTCACTCGGGTGACTTTCTTGCAATATCAAAGATCCGCGGGCGATGGGGCGGGTTTGAGACCCTTGAGAAATGGGTATCCGGGGCGTATGCGGGTCATTCTGCTGTTTGTTTGCGAGACCCGGACGGGAATTTATGGGTTGGGGAATCCGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTACCATGGGACGAGTGGTGGAATTTTGAGTTGACCGAAGATGATTCAAATCCGCATATTGCATTGCTTCCTTTGCATCCCGACCTTCGCGCTAAATTTAACGAGACTGCAGCATGGGAATATGCACAAAGCATGATAGGGTTGCCATATGGTTACCATAATTTGATTTTTAGCTGGATAGATACCATCAGTGATAATTATCCACCACCATTGGATGCTCATCTGGTTGCTTCCGTTATGACAGTGTGGAATCAACTGCAGCCTGCATACGCGGCTAATATGTGGAATGAAGCCTTGAATAAGCGTCTTGGTACAGAGGGGCTTGACCTTCCGGATATTTTAGTTGAAGTTGAAAGGCGTGGTTCATCTTTTGCGGAATTACTAACCATTCCCGAACAAGATGACTGGGTATACGCGGATGGAAAGTCAACTTCTTGTGTTGCTTTTGTCCTTGAAATGTACAAAGAAGCGGGACTCTTTGGAGATCTTGCAAGTGAAATCCAAGTTACCGAGTTCACGATAAAGGATGCTTACATGCTCAAGTTTTTTGAAGACGATTCGAGTCGTTTGCCAAAGTGGTGTAATGAAGGGGACACAGTAGAGCTTCCATATTGTCAAATTAAAGGGAAGTATCGAATGGAACTACCGGGATACAATACTATGGATCCGTACGCTCATATGACCGAAACTTGTCCGTCACTACCCCCGGACTATTTAAGACCGGAATACTGCTAA 1611 44.57 MAPPSPSSTFTCKNQFAITLICIFIVTCTHSPRVQALKAPIRPQDILPLLPRQVSWPLLNTFRGAADLMPSFVGAAPIANNSLLNWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSGKAEYEYVKRKGIAIFLMEAGMIGTLQALWEVFPLFTNTGWGESSNLAFLKKHMGAKFEERPGPFVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPDGNLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNQLQPAYAANMWNEALNKRLGTEGLDLPDILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLASEIQVTEFTIKDAYMLKFFEDDSSRLPKWCNEGDTVELPYCQIKGKYRMELPGYNTMDPYAHMTETCPSLPPDYLRPEYC 536
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03487 536 PANTHER OS01G0793500 PROTEIN 16 536 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03487 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
66578 Cien5g03487 Cien6g00056
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1694825 Cien Cien5g03487 Cien-Chr5:80814902 Cien6g00058 Cien-Chr6:681830
1709030 Cien Cien8g00140 Cien-Chr8:2980762 Cien5g03487 Cien-Chr5:80814902
1714644 Cien Cien5g03487 Cien-Chr5:80814902 Cien6g00056 Cien-Chr6:656968