AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03493 ATGGGTTGGAGGAATGGAGGAGAGTTTCAAAACGAAGAAGATGAAAGAAGATCGCCATCATCACCACTTGTAAACGATGCGTTGCTTTTTACAACCATGTGTATCATTGGCCTCTCTGTTGACGTTCACATCAAAGATGGGTCCATCTATTCTGGAATCTTTCACACTGCCTGTGTTGACGACCGTTATGCTATTGTGTTGAAGCAAGCAAGAATGATGAAGAAGGGAAGTTGTGATTCAAATGTAGCAAATGAGGGCGTTATAGGAACTCTAGTAATCCAGTCAGAGGATCTTGTCCAAGTGGTTGCAAAGAGAGTATTGCTTCCAGCAGATGGTTTTGCTGGACACGAGACCAGGAATGATACAGGGGCTGTTGCATGCTCTTTTCCTTCTAATGATACTCAATGGACTGAAACAAATAAAACAGCACCCAAAAAGTCAAACGTTGACCAACCACAAGCTACTCAAACAAGATGCTTGTCTGGAACTGAGAATGGGGTTCCGATTCAGTCAACTAATTCTCTTGAAGTCGATAAAAATGCAGACACTGGAGGTTCAACAAAGAAGGAAGAAGCGTTGAAGGATTCAGATGATAAGAGAAAGAACGGAGGTTATCATAACAACGGAGTTAAAACCGATAACCATAAGGAATCAATTGTGAGTTCGTCATCAACTCCAACTGAAATCGTCACTTCAAAAATCCCAAATTCCAATCGAACCGCTAAGGAATTTAAACTTAACCCTGGAGCAAAGATATTTTCTCCATCGTTTCCAAATAAAAGATCGGCTACCGCCGGAGCAAATCTTGCATACGTGCCCGACGGATATCCGGCGGTACAGGTGGCGGCGGCACCACCACCACAGCCGGAAGTTGAAATGGCCCCCGCTCCCGGCCCGTATGCTCCTCGTTCTTTACCGGTTAAGTTTGTTCCTTATGGTAATGTACTTTCGGGAAATGGAGGTGGCGATATACAACATCCTCCACCTATTGTTGGATATATGACGAATAGGGCTCAACCGGTCAGATATAGTGGTCAATATCATCCGGTCCAAACCGCACCGACTTATGTCCAACCGGGATCTCCAAATGTAATGGTTGGAAGATTGGGACCGGTTGTCTATGTTCATCCTGTTTCTCAAGACATGGTCCCAAGCACGACTGGTTTCCCTCAAATGTCTACGTGCTCTATTTTAACTCCGCACCAAGTCCATGTACCTAAACACCAAGGAACTGCAGCAGCCCAAGCATTGCAGCTATGTGCAGCACCACCATTTATTGCCACCGGTGGTCAAACCCCGTTTATGTTACCGGGCCACATTCCAATTTCACAACCGCCTTACCCAATGATTCGCCCTATGCCGGTCCCTGGATCTAATGGTTTTTTGGTATCAAAGTTTTCTTGA 1404 45.16 MGWRNGGEFQNEEDERRSPSSPLVNDALLFTTMCIIGLSVDVHIKDGSIYSGIFHTACVDDRYAIVLKQARMMKKGSCDSNVANEGVIGTLVIQSEDLVQVVAKRVLLPADGFAGHETRNDTGAVACSFPSNDTQWTETNKTAPKKSNVDQPQATQTRCLSGTENGVPIQSTNSLEVDKNADTGGSTKKEEALKDSDDKRKNGGYHNNGVKTDNHKESIVSSSSTPTEIVTSKIPNSNRTAKEFKLNPGAKIFSPSFPNKRSATAGANLAYVPDGYPAVQVAAAPPPQPEVEMAPAPGPYAPRSLPVKFVPYGNVLSGNGGGDIQHPPPIVGYMTNRAQPVRYSGQYHPVQTAPTYVQPGSPNVMVGRLGPVVYVHPVSQDMVPSTTGFPQMSTCSILTPHQVHVPKHQGTAAAQALQLCAAPPFIATGGQTPFMLPGHIPISQPPYPMIRPMPVPGSNGFLVSKFS 467
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03493 467 MobiDBLite consensus disorder prediction 1 21 - -
Cien5g03493 467 MobiDBLite consensus disorder prediction 214 230 - -
Cien5g03493 467 PANTHER ATAXIN 2-RELATED 142 454 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Cien5g03493 467 MobiDBLite consensus disorder prediction 182 213 - -
Cien5g03493 467 MobiDBLite consensus disorder prediction 129 181 - -
Cien5g03493 467 Pfam Ataxin 2 SM domain 25 104 IPR025852 -
Cien5g03493 467 MobiDBLite consensus disorder prediction 129 230 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03493 - -